information on F17I23
(26468..26737)
Direction: +
Frame: 2
ORF
26054..26785 (Met: 26135 26564 26726)
PKRTFLYFRFETKWISLVYFVLHRLDSMDSRYSQTSDTGLNRCTLNLQGPTRGGGAQGNN
VSSGSFKKGFRKGSKGLWSIGRSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNKLFV
TSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTAFV
APSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQVITEMPLPVFSYLPLFLCSL
NFYD
GenBank annotation
None
BLASTX cluster
25918..28535 cluster 4 16 hits for protein gene
BLASTN cluster
None
GENSCAN
22270..28613 gene model 5
Grail
26125..26757 exon Phase: 2 Score: 88
Exon-Intron boundary candidatates
Acceptor |
26054 [0.003] (0) |
26080 [0.060] (2) |
26125 [0.97N/0.988] (2) |
26134 [0.007] (2) |
26146 [0.553] (2) |
26156 [0.064] (0) |
26179 [0.184] (2) |
26199 [0.005] (1) |
26280 [0.006] (1) |
26295 [0.055] (1) |
26299 [0.001] (2) |
26313 [0.108] (1) |
26328 [0.003] (1) |
26340 [0.001] (1) |
26355 [0.010] (1) |
26378 [0.095] (0) |
26474 [0.009] (0) |
26499 [0.036] (1) |
26581 [0.004] (2) |
26586 [0.260] (1) |
26669 [0.002] (0) |
26672 [0.002] (0) |
26714 [0.052] (0) |
26724 [0.003] (1) |
Donor |
26079 [0.559] (2) |
26145 [0.005] (2) |
26233 [0.009] (0) |
26243 [0.066] (1) |
26270 [0.011] (1) |
26279 [0.011] (1) |
26536 [0.328] (0) |
26670 [0.004] (2) |
26713 [1.00N/0.767] (0) |
26737 [0.003] (0) |
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Entrance