information on F17I23    (124004..124189)

Direction: +

Frame: 2

ORF

    124004..124582  (Met: 124040 124112 124154 124244 124337 124364 124532)
EVASYARYNYPAMTITRGDFKLRLNQGEFTDSQIIVMLGENGTGKTTFIKMLAGSKLDID
EEGSQVHEIPQFSVSYKNQHMSNRKFEITVRDLIHRKIPNAYAEHQFVSDVMKPLKIEEL
MDKSFNKLSGGEKQRVALALCLGKSADIYLIDEPSAFLDSEQRIIASKVIKRFILQMKKA
AFARFHNGYVFGR

GenBank annotation

    None

BLASTX cluster

    123948..124784    cluster 20    10 hits for protein gene

BLASTN cluster

    None

GENSCAN

    124040..127979    gene model 29
    Suboptimal exon

        124040..124582    Sngl    Phase: 0    Score: 0.676

Grail

    124040..124570    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
124110 [0.004] (1) 124276 [0.005] (2) 124291 [0.90N/0.577] (2) 124295 [0.002] (0)
124314 [0.016] (1) 124332 [0.004] (1) 124392 [0.002] (1) 124490 [0.003] (0)
124532 [0.074] (0) 124541 [0.004] (0) 124582 [0.071] (2)
Donor
124023 [0.88N/0.194] (2) 124163 [0.057] (1) 124198 [0.009] (0) 124253 [0.010] (1)
124326 [0.003] (2) 124391 [0.009] (1) 124408 [0.006] (0) 124430 [0.076] (1)

[help]


Entrance