information on F17I23    (107169..107035)

Direction: -

Frame: 1

ORF

    107610..106345  (Met: 107559 107082 106878 106866 106863 106821 106530 106434)
RNHNQKKKLLVEKSFFEMRADLITIQQTLTPEAATVLNQSIAEATRRNHGHTTPLHVAAT
LLSSSSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTTSTTTTTTSSSSSSSPSQ
TQEPLLSNALTAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREA
SFSSPAVKSAIEQSLIGNSVSNSRQTGSPGIINPSAIGFGYRSVPAPVNRNLYLNPRLQQ
PGVGMQSGMMIQRTDEAKRVIEIMIRTRKRNPVLVGDSEPHILVKEILEKIENGEFSDGA
LRNFQVIRLEKELVSQLATRLGEISGLVETRIGGGGVVLDLGDLKWLVEHPAANGGAVVE
MRKLLERYKGRLCFIGTATCETYLRCQVYYPSMENDWDLQAIPIAAKSSLPAIFPRFVLY
SN

GenBank annotation

    None

BLASTX cluster

    107559..105238    cluster 16    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    107559..104620    gene model 23

Grail

    107559..106342    exon    Phase: 0    Score: 99

Exon-Intron boundary candidatates

Acceptor
106409 [0.001] (1) 106478 [0.023] (1) 106568 [0.003] (1) 106695 [0.122] (0)
106847 [0.005] (1) 106854 [0.003] (0) 107072 [0.006] (1) 107124 [0.004] (0)
107329 [0.003] (2) 107355 [0.003] (0) 107493 [0.012] (0) 107532 [0.618] (0)
107549 [0.94N/0.362] (1) 107554 [0.001] (2)
Donor
106364 [1.00N/0.994] (2) 106473 [0.021] (1) 106485 [0.024] (1) 106499 [0.74N/0.532] (2)
106574 [0.008] (2) 106696 [0.255] (0) 106707 [0.056] (1) 106795 [0.004] (0)
106803 [0.003] (1) 106881 [0.036] (1) 106930 [0.005] (0) 106958 [0.009] (2)
107022 [0.88N/0.177] (1) 107048 [0.115] (2) 107412 [0.018] (1)

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