information on F17I23
(105951..105811)
Direction: -
Frame: 1
ORF
105951..104620 (Met: 105843 105840 105558 105522 105450 104757)
TKDQQIVELQKKWNDLCLRLHPNQSVSERIAPSTLSMMKINTRSDITPPGSPVGTDLVLG
RPNRGLSSPEKKTREARFGKLGDSFDIDLFKKLLKGLAKSVWWQHDAASSVAAAITECKH
GNGKSKGDIWLMFTGPDRAGKSKMASALSDLVSGSQPITISLGSSSRMDDGLNIRGKTAL
DRFAEAVRRNPFAVIVLEDIDEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTAN
SSLGSAKNVASIDETRLESLVNKGWELRLSVCNSSKTRKRKPNWLYSDNDQTKQRKEICF
DLNEAAEFDSSSDVTVEHDQEDNGNLVHKLVGLVDDAILFRPVDFDSIKSKTAESLKKRF
SNGLADGLTVEIEDDALERIAGAIWLSKISLEEWLEEAMGSSLNSVKSRVSSSEDSVIRI
ELEDDLNDRISGGYLPSSIRTVVV
GenBank annotation
None
BLASTX cluster
107559..105238 cluster 16 2 hits for protein gene
BLASTN cluster
104920..104498 cluster 16 2 hits for EST
105657..105352 cluster 17 1 hits for EST
GENSCAN
107559..104620 gene model 23
Grail
105951..104617 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
104681 [0.003] (1) |
104695 [0.009] (2) |
104782 [0.002] (2) |
104807 [0.170] (1) |
104904 [0.002] (0) |
104929 [0.001] (2) |
104948 [0.006] (1) |
105005 [0.027] (1) |
105035 [0.006] (1) |
105091 [0.001] (2) |
105127 [0.009] (2) |
105130 [0.054] (2) |
105260 [0.003] (1) |
105315 [0.003] (0) |
105356 [0.003] (1) |
105416 [0.012] (1) |
105451 [0.032] (2) |
105457 [0.002] (2) |
105487 [0.001] (2) |
105542 [0.005] (1) |
105548 [0.71N/0.871] (1) |
105639 [0.054] (0) |
105652 [0.003] (2) |
105659 [0.016] (1) |
105666 [0.005] (0) |
105675 [0.016] (0) |
105860 [0.002] (1) |
105921 [0.213] (0) |
105936 [0.042] (0) |
105944 [0.002] (1) |
105951 [0.96N/0.937] (0) |
Donor |
104626 [0.018] (0) |
104629 [0.012] (0) |
104643 [0.003] (1) |
104654 [0.74N/0.131] (2) |
104754 [0.009] (1) |
104793 [0.143] (1) |
104808 [0.202] (1) |
105256 [0.010] (0) |
105271 [0.839] (0) |
105276 [0.019] (1) |
105284 [0.009] (2) |
105373 [0.019] (0) |
105394 [0.014] (0) |
105492 [0.018] (1) |
105591 [0.107] (1) |
105759 [0.044] (1) |
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