information on F17I23
(72325..73611)
Direction: +
Frame: 1
ORF
72322..73611 (Met: 72325 72427 72823 73156 73450)
IMPSIEDELFPSTPGKFKIDRSNRQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSG
SRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDN
FNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYAL
ENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLY
AATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGK
NRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVD
ILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYY
GYNTKAKLVH
GenBank annotation
None
BLASTX cluster
72514..73599 cluster 10 13 hits for protein gene
BLASTN cluster
72244..73639 cluster 14 12 hits for EST
72782..73159 cluster 13 2 hits for EST
GENSCAN
72325..73611 gene model 15
Grail
72325..73614 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
72338 [0.044] (1) |
72341 [0.012] (1) |
72486 [0.003] (2) |
72504 [0.002] (2) |
72550 [0.008] (0) |
72723 [0.006] (2) |
72761 [0.014] (1) |
72852 [0.001] (2) |
72888 [0.001] (2) |
72929 [0.001] (1) |
73119 [0.001] (2) |
73149 [0.001] (2) |
73179 [0.016] (2) |
73193 [0.001] (1) |
73283 [0.011] (1) |
73423 [0.210] (0) |
73430 [0.003] (1) |
73457 [0.011] (1) |
Donor |
72364 [0.057] (1) |
72391 [0.018] (1) |
72549 [0.582] (0) |
72583 [0.013] (1) |
72622 [0.004] (1) |
72661 [0.012] (1) |
72782 [0.005] (2) |
72875 [0.051] (2) |
73192 [0.93N/0.157] (1) |
73227 [0.010] (0) |
73321 [0.007] (1) |
73377 [0.027] (0) |
73514 [0.012] (2) |
73544 [0.020] (2) |
73553 [0.004] (2) |
73565 [0.90N/0.118] (2) |
73605 [0.055] (0) |
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Entrance