information on F16J13
(53897..53646)
Direction: -
Frame: 1
ORF
54557..53460 (Met: 54476 54257 54230 54185 54131 54029 53993 53951 53717 53660 53609 53594 53591 53573 53564)
KHYYSFPLLSRVSPRSNYQNQFSSQHRMDPVQSHGSQSSLPPPFHARDFQLHLQQQQQHQ
QQHQQQQQQQFFLHHHQQPQRNLDQDHEQQGGSILNRSIKMDREETSDNMDNIANTNSGS
EGKEMSLHGGEGGSGGGGSGEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIG
DGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSF
LPPPAPPAATGLSVYLAGGQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEM
QTPVQGGGGGGGGGGGMGSPPMMGQQQAMAAMAAAQGLPPNLLGSVQLPPPQQNDQQYWS
TGRPPY
GenBank annotation
54476..53457 F16J13.120
BLASTX cluster
54414..53504 cluster 15 17 hits for protein gene
BLASTN cluster
None
GENSCAN
54476..53460 gene model 9
Grail
54476..53457 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
53516 [0.029] (0) |
53566 [0.002] (1) |
53654 [0.080] (0) |
53665 [0.004] (1) |
53700 [0.002] (2) |
53812 [0.002] (1) |
53938 [0.045] (1) |
53976 [0.001] (2) |
54019 [0.003] (1) |
54131 [0.005] (0) |
54163 [0.001] (1) |
54193 [0.001] (1) |
54204 [0.002] (2) |
54267 [0.012] (2) |
54466 [0.005] (1) |
54477 [0.96N] (2) |
54513 [0.055] (2) |
54525 [0.062] (2) |
Donor |
53464 [0.74N/0.331] (2) |
53474 [0.334] (1) |
53482 [0.006] (2) |
53528 [0.008] (1) |
53754 [0.012] (0) |
53762 [0.104] (1) |
53772 [0.277] (0) |
53869 [0.049] (2) |
53886 [0.152] (0) |
54194 [0.195] (1) |
54283 [0.055] (2) |
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