information on F16J13    (48938..49183)

Direction: +

Frame: 2

ORF

    48611..49183  (Met: 48659 48752 49034)
IVFVVCLVEGEIDTKKMGSEENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRA
EEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEA
EPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKAN
PLVKADKVQRI

GenBank annotation

    48659..49186    F16J13.110

BLASTX cluster

    48665..49183    cluster 14    11 hits for protein gene

BLASTN cluster

    48043..49303    cluster 5    6 hits for EST

GENSCAN

    44704..49183    gene model 8
    34711..30646    gene model 6
    Suboptimal exon

        48659..49183    Sngl    Phase: 0    Score: 0.949

Grail

    48659..49186    exon    Phase: 0    Score: 99

Exon-Intron boundary candidatates

Acceptor
48633 [0.96N/0.800] (1) 48639 [0.940] (1) 48648 [0.411] (1) 48669 [0.030] (1)
48702 [0.003] (1) 48778 [0.293] (2) 48781 [0.001] (2) 48856 [0.002] (2)
48900 [0.003] (1) 48951 [0.204] (1) 48962 [0.006] (0) 49060 [0.001] (2)
49081 [0.072] (2)
Donor
48823 [0.010] (0) 48985 [0.026] (0) 49002 [0.668] (2) 49013 [0.003] (1)
49024 [0.306] (0) 49080 [0.102] (2)

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