information on F16J13
(48938..49183)
Direction: +
Frame: 2
ORF
48611..49183 (Met: 48659 48752 49034)
IVFVVCLVEGEIDTKKMGSEENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRA
EEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEA
EPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKAN
PLVKADKVQRI
GenBank annotation
48659..49186 F16J13.110
BLASTX cluster
48665..49183 cluster 14 11 hits for protein gene
BLASTN cluster
48043..49303 cluster 5 6 hits for EST
GENSCAN
44704..49183 gene model 8
34711..30646 gene model 6
Suboptimal exon
48659..49183 Sngl Phase: 0 Score: 0.949
Grail
48659..49186 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
48633 [0.96N/0.800] (1) |
48639 [0.940] (1) |
48648 [0.411] (1) |
48669 [0.030] (1) |
48702 [0.003] (1) |
48778 [0.293] (2) |
48781 [0.001] (2) |
48856 [0.002] (2) |
48900 [0.003] (1) |
48951 [0.204] (1) |
48962 [0.006] (0) |
49060 [0.001] (2) |
49081 [0.072] (2) |
Donor |
48823 [0.010] (0) |
48985 [0.026] (0) |
49002 [0.668] (2) |
49013 [0.003] (1) |
49024 [0.306] (0) |
49080 [0.102] (2) |
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