information on F16J13    (34123..34028)

Direction: -

Frame: 2

ORF

    34123..32942  (Met: 33922 33874 33643 33451 33124 33115 33103 32959)
IQLFCHFVSTSEAKLVDEIAVDTFKKLNDLAPSGNEGLVGIESRLKNLEKLLSWEDLDTV
HIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIRENSGRSGLESLLQKLFSTVLND
RDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIITTRDS
KLIETIKGRKYVLPKLNDREALKLFSLNAFSNSFPLKEFEGLTNMVLDYAKGHPLALKVL
GSDLCERDDLYWEAKLDRLKSRSHGDIYEVLETSYEELTTEQKNVFLDIACFFRSENVDY
VTSLLNSHGVDVSGVVKDLVDKCLITLSDNRIEMHDMLQTMAKEISLKVETIGIRDCRWL
SRHGNQCQWHIRLWDSEDICDLLTEGLVMSNDIS

GenBank annotation

    34711..30643    F16J13.80

BLASTX cluster

    40346..30814    cluster 11    94 hits for protein gene

BLASTN cluster

    None

GENSCAN

    34711..30646    gene model 6

Grail

    34097..32939    exon    Phase: 2    Score: 86

Exon-Intron boundary candidatates

Acceptor
33008 [0.002] (2) 33050 [0.226] (2) 33066 [0.027] (1) 33075 [0.001] (1)
33203 [0.003] (2) 33237 [0.123] (1) 33242 [0.87N/0.316] (2) 33309 [0.001] (1)
33402 [0.003] (1) 33409 [0.025] (0) 33429 [0.009] (1) 33462 [0.011] (1)
33471 [0.003] (1) 33561 [0.004] (1) 33590 [0.007] (2) 33744 [0.001] (1)
33751 [0.001] (0) 33761 [0.011] (2) 33790 [0.009] (0) 33819 [0.002] (1)
33862 [0.003] (0) 33933 [0.097] (1) 34065 [0.099] (1) 34097 [0.96N/0.091] (2)
34117 [0.024] (0)
Donor
32956 [0.119] (1) 32963 [0.95N/0.782] (0) 33034 [0.068] (1) 33067 [0.008] (1)
33157 [0.004] (1) 33179 [0.059] (0) 33463 [0.025] (1) 33627 [0.014] (2)
33810 [1.00N/0.400] (2) 33820 [0.232] (1) 33856 [0.007] (1) 33868 [0.016] (1)
33877 [0.006] (1) 33994 [0.009] (1) 34015 [0.009] (1)

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