information on F16J13    (3414..3295)

Direction: -

Frame: 3

ORF

    3549..3295  (Met: 3492 3465 3453 3339)
SRSNEKSTKAQHESVIGVVMVVKGKKKAMREEMERRAYEEEALQVRERNDRRHGEPPSRT
EKLVKLIDRNMRNRLSTITEKGREK

GenBank annotation

    None

BLASTX cluster

    5548..1503    cluster 5    2 hits for protein gene
    3295..3414    cluster 1    1 hits for protein gene
    3295..3414    cluster 2    1 hits for protein gene
    3304..3414    cluster 3    1 hits for protein gene
    3304..3414    cluster 4    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    11027..3295    gene model 2
    Suboptimal exon

        3492..3295    Sngl    Phase: 0    Score: 0.861

Grail


    Shadow exon

        3485..3292    exon    Phase: 1    Score: 55

Exon-Intron boundary candidatates

Acceptor
3311 [0.001] (1) 3397 [0.001] (2) 3417 [0.016] (0) 3479 [0.003] (1)
3485 [0.002] (1)
Donor
3418 [0.248] (0)

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