information on F16J13    (32450..31395)

Direction: -

Frame: 1

ORF

    32510..31359  (Met: 32441 31961 31937 31913 31904 31901 31838 31829 31634 31511 31427)
AKVNFDLHQKFDLWLYFFSQDVGMLKWVDLSHSINLRQCLGLANAHNLERLNLEGCTSLK
KLPSTINCLEKLIYLNLRDCTSLRSLPKGIKTQSLQTLILSGCSSLKKFPLISENVEVLL
LDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSQLEVFPEI
KEDMESLEILLMDDTSITEMPKMMHLSNIKTFSLCGTSSHVSVSMFFMPPTLGCSRLTDL
YLSRCSLYKLPDNIGGLSSLQSLCLSGNNIENLPESFNQLNNLKWFDLKFCKMLKSLPVL
PQNLQYLDAHECESLETLANPLTPLTVGERIHSMFIFSNCYKLNQDAQASLVGHARIKSQ
LMANASAKRYYRVFFYPSPFHHQN

GenBank annotation

    34711..30643    F16J13.80

BLASTX cluster

    40346..30814    cluster 11    94 hits for protein gene

BLASTN cluster

    None

GENSCAN

    34711..30646    gene model 6

Grail

    31727..31356    exon    Phase: 0    Score: 80
    32277..31356    exon    Phase: 2    Score: 53
    32450..31356    exon    Phase: 0    Score: 85

Exon-Intron boundary candidatates

Acceptor
31497 [0.004] (2) 31615 [0.036] (1) 31643 [0.002] (0) 31727 [0.021] (0)
31773 [0.001] (2) 31795 [0.076] (1) 31854 [0.004] (2) 31915 [0.005] (1)
31975 [0.004] (1) 32002 [0.93N/0.194] (1) 32033 [0.002] (0) 32129 [0.001] (0)
32146 [0.022] (1) 32208 [0.011] (2) 32259 [0.001] (2) 32277 [0.039] (2)
32297 [0.001] (0) 32347 [0.002] (1) 32396 [0.004] (0) 32450 [0.92N/0.993] (0)
Donor
31395 [1.00N/0.040] (0) 31432 [0.003] (2) 31436 [0.74N/0.843] (1) 31533 [0.008] (0)
31657 [0.012] (2) 31841 [0.003] (1) 31986 [0.059] (0) 32003 [0.006] (1)
32402 [0.020] (1) 32505 [0.028] (0)

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