information on F16J13    (31326..30643)

Direction: -

Frame: 3

ORF

    31419..30646  (Met: 30999 30855 30846 30819 30741)
CFCKTLLSGIFLSFSLSPSKLERKLIFCLLQGFVPEPLVGICYPATEIPSWFCHQRLGRS
LEIPLPPHWCDINFVGLALSVVVSFKDYEDSAKRFSVKCCGNFENKDSSFTRFDFTLAGW
NEPCGSLSHESRKLTSDHVFMGYNSCFLVKNVHGESNSCCYTKASFEFYVTDDETRKKIE
TCEVIKCGMSLMYVPEDDDCMLLKKTNIVQLSLKSGPSCSYDLDDVMDDVRPKRGLCQFV
GGEEPGCKRRKEEKITVR

GenBank annotation

    34711..30643    F16J13.80

BLASTX cluster

    40346..30814    cluster 11    94 hits for protein gene

BLASTN cluster

    None

GENSCAN

    34711..30646    gene model 6
    Suboptimal exon

        31326..30681    Intr    Phase: 0    Score: 0.776

Grail

    31175..30643    exon    Phase: 1    Score: 76
    31326..30643    exon    Phase: 0    Score: 36

Exon-Intron boundary candidatates

Acceptor
30683 [0.003] (1) 30689 [0.002] (1) 30705 [0.006] (0) 30777 [0.005] (0)
30789 [0.020] (0) 30804 [0.001] (0) 30807 [0.001] (0) 30830 [0.002] (1)
30905 [0.047] (1) 30930 [0.001] (0) 30946 [0.002] (2) 31064 [0.80N/0.418] (1)
31147 [0.012] (2) 31151 [0.002] (1) 31161 [0.009] (0) 31175 [0.059] (1)
31326 [1.00N/0.945] (0)
Donor
30652 [0.74N/0.749] (0) 30681 [0.095] (1) 30684 [0.018] (1) 30822 [0.003] (1)
30845 [0.202] (2) 31132 [0.007] (0) 31212 [0.005] (1) 31214 [0.99N/0.363] (2)
31306 [0.006] (0) 31395 [1.00N/0.040] (1)

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