information on F16J13    (45009..45455)

Direction: +

Frame: 1

ORF

    44971..45477  (Met: 45034 45037 45214 45301 45343 45394)
LDISLYYYFSLFRYFVPGLGFMMFAVGINSNERDFLEALKRPDAIFAGYIGQYLIKPLLG
YIFGVIAVSLFNLPTSIGAGIMLVSCVSGAQLSNYTTFLTDPSLAALSIVMTSISTATAV
LVTPMLSLLLIGKKLPVDVFGMISSILQVVITPIAAGLLLNRWDIISID

GenBank annotation

    44299..45928    F16J13.100

BLASTX cluster

    44821..45886    cluster 13    4 hits for protein gene

BLASTN cluster

    None

GENSCAN

    44704..49183    gene model 8
    28260..26848    gene model 5
    Suboptimal exon

        45034..45455    Init    Phase: 0    Score: 0.191
        45037..45455    Init    Phase: 0    Score: 0.183

Grail

    45009..45480    exon    Phase: 2    Score: 88

Exon-Intron boundary candidatates

Acceptor
45009 [0.59N/0.820] (2) 45029 [0.035] (1) 45083 [0.002] (1) 45098 [0.003] (1)
45149 [0.002] (1) 45203 [0.90N/0.267] (1) 45234 [0.001] (2) 45244 [0.007] (0)
45405 [0.001] (2) 45440 [0.029] (1)
Donor
45008 [0.015] (2) 45148 [0.85N/0.035] (1) 45162 [0.006] (0) 45327 [0.004] (0)
45364 [0.88N/0.099] (1) 45455 [0.96N/0.055] (2)

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