information on F16J13
(45009..45455)
Direction: +
Frame: 1
ORF
44971..45477 (Met: 45034 45037 45214 45301 45343 45394)
LDISLYYYFSLFRYFVPGLGFMMFAVGINSNERDFLEALKRPDAIFAGYIGQYLIKPLLG
YIFGVIAVSLFNLPTSIGAGIMLVSCVSGAQLSNYTTFLTDPSLAALSIVMTSISTATAV
LVTPMLSLLLIGKKLPVDVFGMISSILQVVITPIAAGLLLNRWDIISID
GenBank annotation
44299..45928 F16J13.100
BLASTX cluster
44821..45886 cluster 13 4 hits for protein gene
BLASTN cluster
None
GENSCAN
44704..49183 gene model 8
28260..26848 gene model 5
Suboptimal exon
45034..45455 Init Phase: 0 Score: 0.191
45037..45455 Init Phase: 0 Score: 0.183
Grail
45009..45480 exon Phase: 2 Score: 88
Exon-Intron boundary candidatates
Acceptor |
45009 [0.59N/0.820] (2) |
45029 [0.035] (1) |
45083 [0.002] (1) |
45098 [0.003] (1) |
45149 [0.002] (1) |
45203 [0.90N/0.267] (1) |
45234 [0.001] (2) |
45244 [0.007] (0) |
45405 [0.001] (2) |
45440 [0.029] (1) |
Donor |
45008 [0.015] (2) |
45148 [0.85N/0.035] (1) |
45162 [0.006] (0) |
45327 [0.004] (0) |
45364 [0.88N/0.099] (1) |
45455 [0.96N/0.055] (2) |
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Entrance