information on F16J13    (35321..36139)

Direction: +

Frame: 3

ORF

    35274..36221  (Met: 35322 35826 35964 36021 36219)
KNCVLDAACVLELSSSMAATPPISSGSGLSQQLNNSSSSKLCQVEGCQKGARDASGRCIS
HGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNHE
DCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRS
GLCLMHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQSIGCTKGAKGSKMFCKACITKR
PLTIDGGGNMGGVTTGDALNYLKAVKDKFEDSEKYDTFLEVLNDCKHQGYSLLSFHYVSL
LTAGNILIFCGDSCWM

GenBank annotation

    34974..42787    F16J13.90

BLASTX cluster

    None

BLASTN cluster

    None

GENSCAN

    34974..42784    gene model 7
    Suboptimal exon

        35322..36139    Init    Phase: 0    Score: 0.154

Grail

    35321..36139    exon    Phase: 2    Score: 85

Exon-Intron boundary candidatates

Acceptor
35321 [0.003] (2) 35329 [0.010] (1) 35370 [0.002] (0) 35387 [0.006] (2)
35394 [0.005] (0) 35410 [0.015] (1) 35422 [0.005] (1) 35471 [0.002] (2)
35493 [0.002] (0) 35496 [0.007] (0) 35602 [0.123] (1) 35635 [0.001] (1)
35665 [0.005] (1) 35777 [0.004] (2) 35794 [0.025] (1) 35804 [0.008] (2)
35810 [0.002] (2) 35815 [0.015] (1) 35993 [0.002] (2) 36040 [0.004] (1)
36138 [0.004] (0) 36181 [0.025] (1) 36184 [0.187] (1)
Donor
35349 [0.230] (1) 35355 [0.100] (1) 35505 [0.822] (1) 35547 [0.006] (1)
35763 [0.046] (1) 35880 [0.123] (1) 36029 [0.021] (0) 36039 [0.106] (1)
36087 [0.030] (1) 36126 [0.010] (1) 36139 [0.92N/0.029] (2)

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