information on AP22
(85352..86131)
Direction: +
Frame: 2
ORF
85337..86131 (Met: 85402 85814 85829 85859 85361 85417 85506)
VFVCFQSS*TSNTHWRSCDQQMLLHP*TRSAFLQLLSIWHVNLKTSERHKQRYVK*GLTE
VTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFVEKDK
PSAKPIETFDHTYQQPKGKEDKQPKFRQPWLFGTASVMNPAEMISEPAKPNAMDYEKQQL
DKQQQQQLGDKETLPIYLRDHNPFPSNPSPSTGISTINWSFRPSVVPGSSSNLPVIHPPK
LPPGYAEIRGSGSRNADNPHGDF
GenBank annotation
83890..86134 C7A10.710
BLASTX cluster
83896..86131 cluster 19 1 hits for protein gene
BLASTN cluster
None
GENSCAN
83890..86131 gene model 17
Grail
85420..86134 exon Phase: 2 Score: 88
Exon-Intron boundary candidatates
Acceptor |
85364 [0.93N/0.099] (0) |
85371 [0.003] (1) |
85443 [0.029] (1) |
85473 [0.001] (1) |
85596 [0.002] (1) |
85980 [0.271] (1) |
85987 [0.002] (2) |
86089 [0.002] (2) |
86104 [0.004] (2) |
Donor |
85499 [0.009] (1) |
85522 [0.93N/0.600] (0) |
85979 [0.053] (1) |
86090 [0.010] (1) |
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Entrance