information on AP22
(8165..8344)
Direction: +
Frame: 2
ORF
8138..8533 (Met: 8165 8234)
LRKNKKTKDMEFLLFLGCITVFLYAGKGLLLPMGWLTKILKGSSHKFSDGQCNGRYREDR
NLEGPRYSAVSELYCFLVHFELKIKGFLEFLIQEGSDFDKEEIECAIALSLSEQEHVIPQ
DDKGKKIIGNVV
GenBank annotation
8165..10851 C7A10.500
BLASTX cluster
8165..10848 cluster 1 1 hits for protein gene
BLASTN cluster
None
GENSCAN
1560..15852 gene model 1
Suboptimal exon
8165..8213 Init Phase: 0 Score: 0.456
8165..8344 Init Phase: 0 Score: 0.267
8234..8344 Init Phase: 0 Score: 0.121
8262..8344 Intr Phase: 1 Score: 0.430
8387..8522 Intr Phase: 0 Score: 0.282
Grail
8214..8344 exon Phase: 1 Score: 84
8417..8536 exon Phase: 0 Score: 76
Exon-Intron boundary candidatates
Acceptor |
8199 [0.086] (1) |
8214 [0.69N/0.958] (1) |
8308 [0.004] (2) |
8387 [0.011] (0) |
8394 [0.003] (1) |
8417 [0.95N/0.573] (0) |
8421 [0.002] (1) |
Donor |
8213 [0.519] (1) |
8261 [0.030] (1) |
8327 [0.103] (1) |
8344 [1.00N/0.904] (0) |
8348 [0.006] (1) |
8368 [0.004] (0) |
8485 [0.93N/0.066] (0) |
8522 [0.98N/0.020] (1) |
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