information on AP22    (80356..81696)

Direction: +

Frame: 1

ORF

    80269..81735  (Met: 80269 80296 80302 80368 80380 80539 80557 80632 80767 80788 80842 80869 81004 81223 81307 81325 81346 81529 81547 81598)
MTWDGIFFNMIMRIDKIISFFLFFLGICVDTGVMSGAMVFIEEDLKTNDVQIEVLTGILN
LCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFA
LMVAPVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAV
PSLVLAFGILKMPESPRWLIMQGRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCV
DDVVKMEGKKTHGEGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKK
AGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTM
AQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRV
MNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFLLPETKGKSLEEIEALFQRDGD
KVRGENGAA

GenBank annotation

    79935..81738    C7A10.690

BLASTX cluster

    79935..81735    cluster 18    5 hits for protein gene

BLASTN cluster

    None

GENSCAN

    79935..81735    gene model 15
    Suboptimal exon

        80357..80540    Intr    Phase: 1    Score: 0.111

Grail

    80302..81738    exon    Phase: 0    Score: 95

Exon-Intron boundary candidatates

Acceptor
80357 [1.00N/0.901] (1) 80378 [0.001] (1) 80393 [0.005] (1) 80399 [0.003] (1)
80546 [0.004] (1) 80598 [0.027] (2) 80720 [0.008] (1) 80732 [0.028] (1)
80761 [0.004] (0) 80784 [0.001] (2) 80801 [0.033] (1) 80936 [0.005] (1)
81032 [0.001] (1) 81173 [0.093] (1) 81263 [0.007] (1) 81268 [0.038] (0)
81272 [0.86N/0.281] (1) 81297 [0.018] (2) 81411 [0.001] (2) 81462 [0.111] (2)
81469 [0.001] (0) 81484 [0.009] (0) 81489 [0.030] (2) 81570 [0.011] (2)
Donor
80281 [0.711] (1) 80593 [0.005] (1) 80731 [0.009] (1) 80910 [0.006] (0)
81010 [0.490] (1) 81069 [0.039] (0) 81148 [0.007] (1) 81201 [0.008] (0)
81267 [0.194] (0) 81309 [0.015] (0) 81516 [0.006] (0) 81525 [0.028] (0)
81711 [1.00N/0.047] (0) 81727 [0.004] (1)

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