information on AP22
(76631..76903)
Direction: +
Frame: 2
ORF
75635..76936 (Met: 75701 76049 76064 76082 76289 76298 76313 76403 76454 76505 76514 76553 76577 76724)
ATKTLKASPFLATTLHNTHFCKMASSRISLRLVRRFASAAADGTTTAPSSGKISVSKAKS
TLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPK
IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ
LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS
LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDT
ISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK
SVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSK
TDAFPSSAKEAAAA
GenBank annotation
75701..76939 C7A10.680
BLASTX cluster
75653..76909 cluster 17 3 hits for protein gene
BLASTN cluster
75628..75970 cluster 17 1 hits for EST
77038..76445 cluster 18 2 hits for EST
GENSCAN
75701..76936 gene model 14
Grail
75701..76939 exon Phase: 0 Score: 88
Exon-Intron boundary candidatates
Acceptor |
75653 [0.001] (0) |
75750 [0.031] (1) |
76030 [0.069] (2) |
76082 [0.009] (0) |
76298 [0.004] (0) |
76368 [0.033] (1) |
76437 [0.008] (1) |
76617 [0.002] (1) |
76678 [0.130] (2) |
76695 [0.001] (1) |
Donor |
75761 [0.113] (1) |
76197 [0.95N/0.382] (2) |
76232 [0.88N/0.039] (1) |
76304 [0.754] (1) |
76367 [0.026] (1) |
76378 [0.031] (0) |
76405 [0.004] (0) |
76511 [0.006] (1) |
76599 [0.004] (2) |
76616 [0.85N/0.673] (1) |
76715 [0.006] (1) |
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