information on AP22
(44775..44218)
Direction: -
Frame: 1
ORF
44802..44182 (Met: 44775 44532 44499 44412 44310 44298)
RKIWERIFSMGKGGGCVPSKKKKPATTGDGPGIDDDNDATNAPIQIDDDQTTIDGDRTTA
TNTGGTTTPAITTTAAKISSPLKIFVVFYSMYGHVESLAKRMKKGVDSVEGVEATLYRVP
ETLSQEVVEQMKAPVKDLEIPEITAAELTAADGFLFGFPTRYGCMAAQMKAFFDSTGSLW
KEQSLAGKPAGFFVSTGTQGGGQETTA
GenBank annotation
44775..43202 C7A10.610
BLASTX cluster
44775..43205 cluster 11 1 hits for protein gene
BLASTN cluster
44796..43006 cluster 11 2 hits for EST
GENSCAN
44775..39414 gene model 9
Grail
44775..44179 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
44253 [0.003] (0) |
44259 [0.002] (0) |
44292 [0.011] (0) |
44298 [0.047] (0) |
44320 [0.69N/0.003] (2) |
44406 [0.005] (0) |
44412 [0.109] (0) |
44427 [0.004] (0) |
44449 [0.011] (2) |
44490 [0.002] (0) |
44507 [0.004] (1) |
44739 [0.001] (0) |
44759 [0.002] (1) |
44765 [0.033] (1) |
44787 [0.001] (0) |
Donor |
44183 [1.00N/0.951] (2) |
44202 [0.013] (1) |
44244 [0.214] (1) |
44321 [0.526] (2) |
44425 [0.036] (0) |
44715 [0.006] (1) |
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Entrance