information on AP22    (42334..42152)

Direction: -

Frame: 3

ORF

    42496..42173  (Met: 42238 42232 42202)
SEYVSARDKRREFVSGFSGSAGLFLFSIVLDSNIVRIESLIESELNLIGDYKYIGLALIT
KKEARLWTDGRYFLQALQQLSDEWTLMRMGEDPLVEVWMSDVSPQLIF

GenBank annotation

    42695..39437    C7A10.600

BLASTX cluster

    42695..39440    cluster 10    3 hits for protein gene

BLASTN cluster

    None

GENSCAN

    44775..39414    gene model 9

Grail

    42333..42170    exon    Phase: 1    Score: 88
    42496..42170    exon    Phase: 0    Score: 89

Exon-Intron boundary candidatates

Acceptor
42259 [0.002] (0) 42291 [0.044] (1) 42310 [0.004] (0) 42313 [0.001] (0)
42333 [0.96N/0.707] (1) 42494 [0.001] (2) 42496 [0.94N/0.783] (0)
Donor
42194 [0.96N/0.056] (0) 42201 [0.013] (2) 42433 [1.00N/0.996] (1) 42456 [0.003] (2)
42466 [0.028] (1)

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