information on AP22
(31271..31119)
Direction: -
Frame: 2
ORF
31754..31116 (Met: 31646 31622 31589 31565 31478 31433 31397 31229 31226 31121)
DLECKQSFFLFVLGFDHNQTAALLGVFATGGAIGTLMGGIIADKMSRIYPNSGRVMCAQF
SAFMGIPFSIILLKVIPQSTSSYSIFSITLFLMGLTITWCGSAVNAPMFAEVVPPRHRTM
IYAFDRAFEGSFSSFAAPLVGILSEKLFGYDSRGIDPLKGSSVREADALSKGLLSMMAVP
FGLCCLCYTPLHFVFQKDRENAKIASSKETEMI
GenBank annotation
33057..31113 C7A10.570
BLASTX cluster
33057..31116 cluster 8 2 hits for protein gene
BLASTN cluster
None
GENSCAN
32674..31384 gene model 6
37826..39196 gene model 8
Suboptimal exon
31714..31265 Intr Phase: 1 Score: 0.404
31714..31295 Intr Phase: 1 Score: 0.147
31714..31598 Intr Phase: 1 Score: 0.108
Grail
31714..31113 exon Phase: 1 Score: 83
Exon-Intron boundary candidatates
Acceptor |
31162 [0.011] (1) |
31166 [0.88N/0.786] (0) |
31241 [0.002] (0) |
31276 [0.048] (1) |
31321 [0.78N/0.053] (1) |
31423 [0.049] (1) |
31447 [0.005] (1) |
31666 [0.496] (1) |
31690 [0.038] (1) |
31697 [0.164] (0) |
31714 [0.96N/0.952] (1) |
Donor |
31277 [0.013] (1) |
31295 [0.016] (1) |
31309 [0.010] (2) |
31338 [0.005] (0) |
31366 [1.00N/0.102] (2) |
31403 [0.004] (1) |
31598 [0.007] (1) |
31745 [0.010] (1) |
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Entrance