information on AP22    (31721..31116)

Direction: -

Frame: 2

ORF

    31754..31116  (Met: 31646 31622 31589 31565 31478 31433 31397 31229 31226 31121)
DLECKQSFFLFVLGFDHNQTAALLGVFATGGAIGTLMGGIIADKMSRIYPNSGRVMCAQF
SAFMGIPFSIILLKVIPQSTSSYSIFSITLFLMGLTITWCGSAVNAPMFAEVVPPRHRTM
IYAFDRAFEGSFSSFAAPLVGILSEKLFGYDSRGIDPLKGSSVREADALSKGLLSMMAVP
FGLCCLCYTPLHFVFQKDRENAKIASSKETEMI

GenBank annotation

    33057..31113    C7A10.570

BLASTX cluster

    33057..31116    cluster 8    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    32674..31384    gene model 6
    37826..39196    gene model 8
    Suboptimal exon

        31714..31265    Intr    Phase: 1    Score: 0.404
        31714..31295    Intr    Phase: 1    Score: 0.147
        31714..31598    Intr    Phase: 1    Score: 0.108

Grail

    31714..31113    exon    Phase: 1    Score: 83

Exon-Intron boundary candidatates

Acceptor
31162 [0.011] (1) 31166 [0.88N/0.786] (0) 31241 [0.002] (0) 31276 [0.048] (1)
31321 [0.78N/0.053] (1) 31423 [0.049] (1) 31447 [0.005] (1) 31666 [0.496] (1)
31690 [0.038] (1) 31697 [0.164] (0) 31714 [0.96N/0.952] (1)
Donor
31277 [0.013] (1) 31295 [0.016] (1) 31309 [0.010] (2) 31338 [0.005] (0)
31366 [1.00N/0.102] (2) 31403 [0.004] (1) 31598 [0.007] (1) 31745 [0.010] (1)

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