information on AP22    (191805..191924)

Direction: +

Frame: 3

ORF

    191787..192410  (Met: 191856 191865)
RVYFVLFQTYFDAPEGNEPLALDMEGMGKGQIWVNGESIGRYWTAFATGDCSHCSYTGTY
KPNKCQTGCGQPTQRWYHVPRAWLKPSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSE
YHPNIKNWQIESYGKGQTFHRPKVHLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAA
TSYAILERVKDIIFTQLKLESDSSSFFF

GenBank annotation

    188285..192579    C7A10.1000

BLASTX cluster

    188276..192576    cluster 43    25 hits for protein gene

BLASTN cluster

    191809..192955    cluster 39    4 hits for EST

GENSCAN

    185687..195679    gene model 38

Grail

    191811..192350    exon    Phase: 0    Score: 89

Exon-Intron boundary candidatates

Acceptor
191811 [1.00N/0.996] (0) 191833 [0.94N/0.014] (1) 191863 [0.001] (1) 191942 [0.001] (2)
191951 [0.008] (2) 192011 [0.001] (2) 192124 [0.010] (1) 192139 [0.003] (1)
192233 [0.001] (2) 192238 [0.033] (1) 192286 [0.042] (1) 192375 [0.006] (0)
Donor
191874 [0.476] (1) 191892 [0.006] (1) 191931 [0.027] (1) 192013 [0.005] (2)
192034 [0.006] (2) 192215 [0.476] (0) 192237 [0.038] (1) 192350 [0.96N/0.652] (0)

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