information on AP22    (171679..171584)

Direction: -

Frame: 3

ORF

    171841..171437  (Met: 171838 171727 171556 171526)
IMGLGFVNHYKSKGKLFELSDGNYKTELHHPCISRNVGMLLQQYKCFGSSAASLIQRNPL
FSSLDSKDVSYFKEILGEKNVVEDKERLETANTDWMHKYKGSSKLMLLPKNTQEVFYFSL
VSTVLLCLDCDDYLC

GenBank annotation

    171838..168947    C7A10.960

BLASTX cluster

    171838..168950    cluster 40    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    171727..168323    gene model 34
    Suboptimal exon

        171838..171500    Init    Phase: 0    Score: 0.334

Grail

    171828..171434    exon    Phase: 1    Score: 89

Exon-Intron boundary candidatates

Acceptor
171561 [0.019] (1) 171612 [0.073] (1) 171622 [0.004] (0) 171673 [0.051] (0)
171687 [0.002] (1) 171712 [0.004] (0) 171737 [0.004] (2) 171801 [0.006] (1)
171828 [0.94N/0.380] (1)
Donor
171473 [0.006] (0) 171500 [0.96N/0.183] (0) 171535 [0.74N/0.244] (1)

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Entrance