information on AP22
(17364..16540)
Direction: -
Frame: 1
ORF
17427..16540 (Met: 17253 17247 17103 16662)
SSTEAGPIAPLSGSGIIFFCGSELGDLCYVIGGIINGNPTSDVLFLNCFSQTWHRVPSMK
MARASASASLIDGKIYVFGGCPEDADSSNWAEVFDPVYQTWGIFNTPKMAHSINQSVVIE
EKKVYAVDEEDQSFSFLPSEGRIWKSGKKDSKVGGRHDWCVIGKLLYCRATRGRILWCQP
DELDWKEVKGLEQLQLYLSGTRYIFRRTSDKRPSKTNVKYDIRKISSNSAGNIVIFGNAH
IGDPECVELWSAEISMERREGGEIWGKIEWSNVVFKLDPLSNSYSVDVLFSASVHL
GenBank annotation
18093..16537 C7A10.520
BLASTX cluster
18093..16540 cluster 3 1 hits for protein gene
BLASTN cluster
18385..10568 cluster 2 2 hits for EST
GENSCAN
19907..16244 gene model 2
Grail
17247..16537 exon Phase: 0 Score: 86
Exon-Intron boundary candidatates
Acceptor |
16810 [0.008] (2) |
16822 [0.003] (2) |
16848 [0.002] (0) |
17006 [0.011] (1) |
17069 [0.001] (1) |
17189 [0.012] (1) |
17247 [0.010] (0) |
17274 [0.77N/0.680] (0) |
17427 [0.003] (0) |
Donor |
16619 [0.007] (2) |
16644 [0.708] (1) |
16777 [0.004] (0) |
16830 [0.009] (1) |
16860 [0.150] (1) |
16867 [0.780] (0) |
16952 [0.023] (2) |
16965 [0.078] (1) |
16972 [0.93N/0.537] (0) |
17007 [0.86N/0.106] (1) |
17059 [0.013] (0) |
17124 [0.84N/0.015] (1) |
17152 [0.84N/0.546] (0) |
17367 [0.010] (1) |
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