information on AP22    (17364..16540)

Direction: -

Frame: 1

ORF

    17427..16540  (Met: 17253 17247 17103 16662)
SSTEAGPIAPLSGSGIIFFCGSELGDLCYVIGGIINGNPTSDVLFLNCFSQTWHRVPSMK
MARASASASLIDGKIYVFGGCPEDADSSNWAEVFDPVYQTWGIFNTPKMAHSINQSVVIE
EKKVYAVDEEDQSFSFLPSEGRIWKSGKKDSKVGGRHDWCVIGKLLYCRATRGRILWCQP
DELDWKEVKGLEQLQLYLSGTRYIFRRTSDKRPSKTNVKYDIRKISSNSAGNIVIFGNAH
IGDPECVELWSAEISMERREGGEIWGKIEWSNVVFKLDPLSNSYSVDVLFSASVHL

GenBank annotation

    18093..16537    C7A10.520

BLASTX cluster

    18093..16540    cluster 3    1 hits for protein gene

BLASTN cluster

    18385..10568    cluster 2    2 hits for EST

GENSCAN

    19907..16244    gene model 2

Grail

    17247..16537    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
16810 [0.008] (2) 16822 [0.003] (2) 16848 [0.002] (0) 17006 [0.011] (1)
17069 [0.001] (1) 17189 [0.012] (1) 17247 [0.010] (0) 17274 [0.77N/0.680] (0)
17427 [0.003] (0)
Donor
16619 [0.007] (2) 16644 [0.708] (1) 16777 [0.004] (0) 16830 [0.009] (1)
16860 [0.150] (1) 16867 [0.780] (0) 16952 [0.023] (2) 16965 [0.078] (1)
16972 [0.93N/0.537] (0) 17007 [0.86N/0.106] (1) 17059 [0.013] (0) 17124 [0.84N/0.015] (1)
17152 [0.84N/0.546] (0) 17367 [0.010] (1)

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