information on AP22    (145088..144891)

Direction: -

Frame: 2

ORF

    145298..144879  (Met: 145217 145205 145190 145106 145091 145076 145043 145034 145025 144974 144953)
AEEVYAIQEACNNATTEGGRSPIFTGVMALVMGVVTMIKVTKNVPRKLTESTLYSSPVYC
DDASMNKSAMQSEKMTVPAISGEDFMAIMKRMAELEQKVTVLSAQPTVMPPDKEEMLNAA
ISRSNVLEQELAATKKVHTF

GenBank annotation

    147289..144611    C7A10.870

BLASTX cluster

    147289..144763    cluster 31    7 hits for protein gene

BLASTN cluster

    None

GENSCAN

    150821..139971    gene model 29
    102142..103868    gene model 21
    Suboptimal exon

        145217..144891    Init    Phase: 0    Score: 0.117
        145222..144891    Intr    Phase: 1    Score: 0.155
        145294..144891    Intr    Phase: 1    Score: 0.303
        145297..144891    Intr    Phase: 1    Score: 0.203

Grail

    145294..144876    exon    Phase: 1    Score: 90

Exon-Intron boundary candidatates

Acceptor
145007 [0.042] (0) 145054 [0.003] (1) 145180 [0.001] (1) 145222 [0.009] (1)
145271 [0.001] (0) 145273 [0.002] (1) 145288 [0.007] (1) 145291 [0.017] (1)
145294 [0.95N/0.599] (1) 145297 [0.003] (1)
Donor
144891 [1.00N/0.995] (0) 145087 [0.014] (2) 145221 [0.006] (0) 145240 [0.147] (2)

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Entrance