information on AP22    (136484..136534)

Direction: +

Frame: 2

ORF

    136247..137953  (Met: 136271 136283 136697 136703 136832 136988 137066 137537 137600 137696 137798 137855)
ERPVRRQSMKEKMRVALEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEK
ERQIKERQEREENERRAKEVLEQAENERKLKEALEQKENERRLKETREKEENKKKLREAI
ELEEKEKRLIEAFERAEIERRLKEDLEQEEMRMRLQEAKERERLHRENQEHQENERKQHE
YSGEESDEKERDACEMEKTCETTKEAHGEQSSNESLSDTLEENESIDNDVSVNKQKKEEE
GTRQRESMSAETCPWKVFEKTLKDASQKEGTNEMDADTRLFERNEETPRLGENGGCNQQN
GESGEESTSVTENIIGGKLEQKSKNSETSKDASVLKRVSGLKTEVEERLEDVVGVGRDQR
NPEESKSAPKTSYGFRNHEYKFTHQQERGNIYETQAGLNQDAKVERPLPSRVSVQREKEA
ERLKRERDLEMEQLRKVEEEREREREREKDRMAFDQRALADARERLEKACAEAREKSLPD
KLSMEARLRAERAAVERATSEARDRAAEKAAFEARERMERSVSDKQSQSSGFFGERMEIS
LSDKQFQNSVSFGASRYQDSHGKNTLKTL

GenBank annotation

    133984..139541    C7A10.840

BLASTX cluster

    133984..144113    cluster 30    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    127799..139538    gene model 28
    Suboptimal exon

        136305..137930    Intr    Phase: 1    Score: 0.992

Grail

    136832..137930    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
136264 [0.002] (2) 136268 [0.002] (0) 136496 [0.377] (0) 136500 [0.004] (1)
136656 [0.78N/0.027] (1) 136691 [0.230] (0) 136794 [0.031] (1) 136926 [0.002] (1)
136998 [0.007] (1) 137015 [0.001] (0) 137027 [0.001] (0) 137083 [0.009] (2)
137193 [0.036] (1) 137307 [0.247] (1) 137326 [0.002] (2) 137334 [0.002] (1)
137374 [0.005] (2) 137405 [0.028] (0) 137436 [0.005] (1) 137555 [0.004] (0)
137615 [0.003] (0) 137690 [0.002] (0) 137702 [0.001] (0) 137718 [0.342] (1)
137895 [0.005] (1) 137914 [0.003] (2)
Donor
136255 [0.015] (0) 136370 [0.026] (1) 136483 [0.004] (0) 136565 [0.006] (1)
137014 [0.036] (0) 137082 [0.038] (2) 137117 [0.023] (1) 137156 [0.531] (1)
137257 [0.018] (0) 137339 [0.88N/0.761] (1) 137435 [0.059] (1) 137492 [0.007] (1)
137554 [0.014] (0) 137837 [0.398] (1) 137846 [0.004] (1) 137930 [1.00N/0.053] (1)

[help]


Entrance