information on AP22
(135919..136062)
Direction: +
Frame: 1
ORF
134440..136296 (Met: 134674 135046 135613 135910 135916 135961 136174 136243)
KSKLYDSICGKEPSFLRIELYFVCRTPEEVESCSGGTEHSGKSPCFSNGRDSYDSIDGST
EFNISYNKASQISGGETNMSSSGVIRVADLGAIPGYTVAVDGTTKLNKVTGPSSVGRGTS
RFVFEDKYYSSEPFVTVSEIGLKTHPTGIPPPSRAAPILKSDFRSSASNSKTTGSQGSVD
SSSSPTFFDVEVDANSAAVREAMLKAEAKLKSAKELLERKRDVARTTSTPSSTKNRIKEE
GKSSYAAGLPVVKSNIDVARKSLKDKRGSKSLSSQGSATSDGNDEWKEANNQYVELVRTE
LPRNADENSGGKDVSIPLNAEFFDQELTWAGNVDWEKQRRRAKGDREDHEARKLPKHSGT
RKLSSRHKRHENKLAEKAPEEPKIEKSRHVEMGNDLPDHGGIVKHRNLLKPEENKLFTEK
PAKQKKELLCEEKTKRIQNQQLDKKTHQKAAETNQECVYDWEQNARKLREALGNESTLEV
SVELNGNGKKMEMRSQSETKLNEPLKRMEEETRIKEARLREENDRRERVAVEKAENEKRL
KAALEQEEKERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENR
RMREACEKAEHERKNESCT
GenBank annotation
133984..139541 C7A10.840
BLASTX cluster
133984..144113 cluster 30 2 hits for protein gene
BLASTN cluster
None
GENSCAN
127799..139538 gene model 28
Grail
134514..136299 exon Phase: 2 Score: 90
Exon-Intron boundary candidatates
Acceptor |
134490 [0.002] (2) |
134514 [0.97N/0.993] (2) |
134531 [0.024] (1) |
134543 [0.053] (1) |
134552 [0.002] (1) |
134589 [0.001] (2) |
134621 [0.044] (1) |
134645 [0.006] (1) |
134653 [0.013] (0) |
134702 [0.004] (1) |
134738 [0.021] (1) |
134790 [0.001] (2) |
134829 [0.005] (2) |
134857 [0.001] (0) |
134869 [0.84N/0.026] (0) |
134978 [0.001] (1) |
134988 [0.001] (2) |
135011 [0.083] (1) |
135013 [0.011] (0) |
135029 [0.068] (1) |
135092 [0.001] (1) |
135096 [0.003] (2) |
135100 [0.001] (0) |
135215 [0.002] (1) |
135232 [0.013] (0) |
135238 [0.002] (0) |
135266 [0.001] (1) |
135338 [0.69N/0.036] (1) |
135415 [0.80N/0.929] (0) |
135418 [0.012] (0) |
135431 [0.654] (1) |
135537 [0.011] (2) |
135571 [0.002] (0) |
135657 [0.006] (2) |
135674 [0.004] (1) |
135763 [0.020] (0) |
135791 [0.007] (1) |
135805 [0.002] (0) |
135924 [0.004] (2) |
136014 [0.002] (2) |
136039 [0.007] (0) |
136043 [0.005] (1) |
136121 [0.008] (1) |
136204 [0.068] (0) |
136225 [0.021] (0) |
136229 [0.001] (1) |
136232 [0.001] (1) |
136264 [0.002] (0) |
136268 [0.002] (1) |
Donor |
134584 [0.010] (1) |
134686 [0.004] (1) |
134763 [0.136] (0) |
134785 [0.005] (1) |
134791 [0.74N/0.593] (1) |
134797 [0.006] (1) |
134819 [0.005] (2) |
135181 [0.212] (1) |
135199 [0.007] (1) |
135266 [0.077] (2) |
135812 [0.013] (2) |
135856 [0.071] (1) |
135865 [0.222] (1) |
135876 [0.017] (0) |
135901 [0.011] (1) |
136255 [0.015] (1) |
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