information on AP22    (135919..136062)

Direction: +

Frame: 1

ORF

    134440..136296  (Met: 134674 135046 135613 135910 135916 135961 136174 136243)
KSKLYDSICGKEPSFLRIELYFVCRTPEEVESCSGGTEHSGKSPCFSNGRDSYDSIDGST
EFNISYNKASQISGGETNMSSSGVIRVADLGAIPGYTVAVDGTTKLNKVTGPSSVGRGTS
RFVFEDKYYSSEPFVTVSEIGLKTHPTGIPPPSRAAPILKSDFRSSASNSKTTGSQGSVD
SSSSPTFFDVEVDANSAAVREAMLKAEAKLKSAKELLERKRDVARTTSTPSSTKNRIKEE
GKSSYAAGLPVVKSNIDVARKSLKDKRGSKSLSSQGSATSDGNDEWKEANNQYVELVRTE
LPRNADENSGGKDVSIPLNAEFFDQELTWAGNVDWEKQRRRAKGDREDHEARKLPKHSGT
RKLSSRHKRHENKLAEKAPEEPKIEKSRHVEMGNDLPDHGGIVKHRNLLKPEENKLFTEK
PAKQKKELLCEEKTKRIQNQQLDKKTHQKAAETNQECVYDWEQNARKLREALGNESTLEV
SVELNGNGKKMEMRSQSETKLNEPLKRMEEETRIKEARLREENDRRERVAVEKAENEKRL
KAALEQEEKERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENR
RMREACEKAEHERKNESCT

GenBank annotation

    133984..139541    C7A10.840

BLASTX cluster

    133984..144113    cluster 30    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    127799..139538    gene model 28

Grail

    134514..136299    exon    Phase: 2    Score: 90

Exon-Intron boundary candidatates

Acceptor
134490 [0.002] (2) 134514 [0.97N/0.993] (2) 134531 [0.024] (1) 134543 [0.053] (1)
134552 [0.002] (1) 134589 [0.001] (2) 134621 [0.044] (1) 134645 [0.006] (1)
134653 [0.013] (0) 134702 [0.004] (1) 134738 [0.021] (1) 134790 [0.001] (2)
134829 [0.005] (2) 134857 [0.001] (0) 134869 [0.84N/0.026] (0) 134978 [0.001] (1)
134988 [0.001] (2) 135011 [0.083] (1) 135013 [0.011] (0) 135029 [0.068] (1)
135092 [0.001] (1) 135096 [0.003] (2) 135100 [0.001] (0) 135215 [0.002] (1)
135232 [0.013] (0) 135238 [0.002] (0) 135266 [0.001] (1) 135338 [0.69N/0.036] (1)
135415 [0.80N/0.929] (0) 135418 [0.012] (0) 135431 [0.654] (1) 135537 [0.011] (2)
135571 [0.002] (0) 135657 [0.006] (2) 135674 [0.004] (1) 135763 [0.020] (0)
135791 [0.007] (1) 135805 [0.002] (0) 135924 [0.004] (2) 136014 [0.002] (2)
136039 [0.007] (0) 136043 [0.005] (1) 136121 [0.008] (1) 136204 [0.068] (0)
136225 [0.021] (0) 136229 [0.001] (1) 136232 [0.001] (1) 136264 [0.002] (0)
136268 [0.002] (1)
Donor
134584 [0.010] (1) 134686 [0.004] (1) 134763 [0.136] (0) 134785 [0.005] (1)
134791 [0.74N/0.593] (1) 134797 [0.006] (1) 134819 [0.005] (2) 135181 [0.212] (1)
135199 [0.007] (1) 135266 [0.077] (2) 135812 [0.013] (2) 135856 [0.071] (1)
135865 [0.222] (1) 135876 [0.017] (0) 135901 [0.011] (1) 136255 [0.015] (1)

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