information on AP22    (124781..124641)

Direction: -

Frame: 2

ORF

    124781..124194  (Met: 124730)
FQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDYSVINSDHTTSLGAVIIFISDKSFISP
NFLLLVREVTYFLFCFAERSYIIKLGNSLTVSLQQLENRFCFQFLQPQVKKLGIASLKKS
RFFVVVLSIYLSYLKFEPKETEETNPKIFLNLLSSYKYSDLHIFQGICICVEEREKTLVV
IAIPFFVHCKIKLLWS

GenBank annotation

    126005..124454    C7A10.820

BLASTX cluster

    125696..124457    cluster 28    1 hits for protein gene

BLASTN cluster

    124123..124783    cluster 26    2 hits for EST

GENSCAN



    None


Grail
    124775..124191    exon    Phase: 0    Score: 86
    125134..124782    exon    Phase: 1    Score: 87



    Shadow exon

        124549..124191    exon    Phase: 1    Score: 36



Exon-Intron boundary candidatates



Acceptor




124267 [0.009] (1)
124286 [0.719] (0)
124363 [0.001] (1)
124463 [0.005] (0)




124496 [0.005] (0)
124529 [0.009] (0)
124545 [0.040] (2)
124549 [0.96N/0.976] (1)




124621 [0.001] (1)
124663 [0.005] (1)
124675 [0.011] (1)
124684 [0.002] (1)




124697 [0.003] (0)
124750 [0.002] (1)
124762 [0.93N/0.789] (1)
124775 [0.96N/0.801] (0)




124781 [0.83N/0.008] (0)




Donor



124420 [0.017] (2)
124458 [0.96N/0.031] (0)
124641 [0.96N/0.140] (0)
124717 [0.011] (2)



124751 [0.052] (1)










[help]






Entrance