information on AP22    (105197..104886)

Direction: -

Frame: 2

ORF

    105314..104451  (Met: 105098 105065 105011 104978 104924 104804 104594 104552 104474)
LIQYCNRGLGGKKAEAEEAAESAKNYAYDKAGSAYDNAGYAKDFASDKAGSAYDSAHNAK
HYAYDKAGDAKDMAYDKTGQAKYMAYDKAGSAYEKAGQAKDMAYDKAGQAKDMAYDKVGS
AYDKAGQAKDMAYDKAGSASEKAGQAKDFAYDKAAHAKDAAYNKAEDVIKMATDTSGEAK
DSAYGTYERFKEGSKNAKDIASDKAHDVRETAGRAVDYAKDKANDAYESGSEAAGRFDEA
MHKVGERYGAVKDSMSENTKEAYESAKEKASDAAGEYGSYMRDRSAEL

GenBank annotation

    105748..104448    C7A10.760

BLASTX cluster

    105712..104451    cluster 24    1 hits for protein gene

BLASTN cluster

    104267..105765    cluster 23    2 hits for EST

GENSCAN

    105769..104451    gene model 22
    Suboptimal exon

        105278..104451    Term    Phase: 0    Score: 0.160

Grail

    105294..104448    exon    Phase: 2    Score: 90

Exon-Intron boundary candidatates

Acceptor
104513 [0.001] (0) 104677 [0.017] (1) 104701 [0.005] (1) 104818 [0.002] (1)
104851 [0.002] (1) 104855 [0.003] (0) 104963 [0.001] (0) 105029 [0.004] (0)
105046 [0.029] (1) 105100 [0.001] (1) 105116 [0.032] (0) 105265 [0.004] (1)
105283 [0.003] (1) 105292 [0.002] (1) 105294 [0.97N/0.959] (2)
Donor
104483 [0.021] (1) 104488 [0.009] (2) 104492 [0.216] (1) 104570 [0.004] (1)
104575 [0.885] (2) 104586 [0.314] (0) 104767 [0.007] (2) 104771 [0.004] (1)
104814 [0.005] (0) 104964 [0.018] (0) 104993 [0.004] (1)

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