information on AP22
(105197..104886)
Direction: -
Frame: 2
ORF
105314..104451 (Met: 105098 105065 105011 104978 104924 104804 104594 104552 104474)
LIQYCNRGLGGKKAEAEEAAESAKNYAYDKAGSAYDNAGYAKDFASDKAGSAYDSAHNAK
HYAYDKAGDAKDMAYDKTGQAKYMAYDKAGSAYEKAGQAKDMAYDKAGQAKDMAYDKVGS
AYDKAGQAKDMAYDKAGSASEKAGQAKDFAYDKAAHAKDAAYNKAEDVIKMATDTSGEAK
DSAYGTYERFKEGSKNAKDIASDKAHDVRETAGRAVDYAKDKANDAYESGSEAAGRFDEA
MHKVGERYGAVKDSMSENTKEAYESAKEKASDAAGEYGSYMRDRSAEL
GenBank annotation
105748..104448 C7A10.760
BLASTX cluster
105712..104451 cluster 24 1 hits for protein gene
BLASTN cluster
104267..105765 cluster 23 2 hits for EST
GENSCAN
105769..104451 gene model 22
Suboptimal exon
105278..104451 Term Phase: 0 Score: 0.160
Grail
105294..104448 exon Phase: 2 Score: 90
Exon-Intron boundary candidatates
Acceptor |
104513 [0.001] (0) |
104677 [0.017] (1) |
104701 [0.005] (1) |
104818 [0.002] (1) |
104851 [0.002] (1) |
104855 [0.003] (0) |
104963 [0.001] (0) |
105029 [0.004] (0) |
105046 [0.029] (1) |
105100 [0.001] (1) |
105116 [0.032] (0) |
105265 [0.004] (1) |
105283 [0.003] (1) |
105292 [0.002] (1) |
105294 [0.97N/0.959] (2) |
Donor |
104483 [0.021] (1) |
104488 [0.009] (2) |
104492 [0.216] (1) |
104570 [0.004] (1) |
104575 [0.885] (2) |
104586 [0.314] (0) |
104767 [0.007] (2) |
104771 [0.004] (1) |
104814 [0.005] (0) |
104964 [0.018] (0) |
104993 [0.004] (1) |
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Entrance