information on AP22    (102325..102792)

Direction: +

Frame: 1

ORF

    101995..102813  (Met: 102142 102187 102193 102556 102592 102631)
HFNKFQIQVPILQVTFEKIEWKKCLYNVASHLGFSSNISQQQQQNKTCTMVNFVEVQKPL
LYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKKPVVLLIHGFAG
EGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVKGLRILGVDKFVP
VGFSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINEASLNRLGFSSSTDLLLPTSVT
GLKALFTIAVHKPLWFPKRLFKDYIEVIITTQS

GenBank annotation

    102142..103871    C7A10.750

BLASTX cluster

    102142..103868    cluster 23    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    102142..103868    gene model 21
    Suboptimal exon

        102142..102813    Sngl    Phase: 0    Score: 0.238
        102193..102792    Init    Phase: 0    Score: 0.127

Grail

    102556..102811    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
102049 [0.002] (0) 102160 [0.001] (0) 102221 [0.003] (1) 102223 [0.001] (0)
102233 [0.003] (1) 102262 [0.002] (0) 102359 [0.006] (1) 102376 [0.005] (0)
102539 [0.132] (1) 102546 [0.009] (2) 102724 [0.001] (0)
Donor
102144 [0.005] (0) 102159 [0.056] (0) 102283 [0.005] (1) 102385 [0.004] (1)
102492 [0.005] (0) 102594 [0.308] (0) 102616 [0.015] (1) 102665 [0.120] (2)
102792 [1.00N/0.869] (0) 102811 [0.004] (1)

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