information on AP22
(102325..102792)
Direction: +
Frame: 1
ORF
101995..102813 (Met: 102142 102187 102193 102556 102592 102631)
HFNKFQIQVPILQVTFEKIEWKKCLYNVASHLGFSSNISQQQQQNKTCTMVNFVEVQKPL
LYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKKPVVLLIHGFAG
EGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVKGLRILGVDKFVP
VGFSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINEASLNRLGFSSSTDLLLPTSVT
GLKALFTIAVHKPLWFPKRLFKDYIEVIITTQS
GenBank annotation
102142..103871 C7A10.750
BLASTX cluster
102142..103868 cluster 23 2 hits for protein gene
BLASTN cluster
None
GENSCAN
102142..103868 gene model 21
Suboptimal exon
102142..102813 Sngl Phase: 0 Score: 0.238
102193..102792 Init Phase: 0 Score: 0.127
Grail
102556..102811 exon Phase: 0 Score: 86
Exon-Intron boundary candidatates
Acceptor |
102049 [0.002] (0) |
102160 [0.001] (0) |
102221 [0.003] (1) |
102223 [0.001] (0) |
102233 [0.003] (1) |
102262 [0.002] (0) |
102359 [0.006] (1) |
102376 [0.005] (0) |
102539 [0.132] (1) |
102546 [0.009] (2) |
102724 [0.001] (0) |
Donor |
102144 [0.005] (0) |
102159 [0.056] (0) |
102283 [0.005] (1) |
102385 [0.004] (1) |
102492 [0.005] (0) |
102594 [0.308] (0) |
102616 [0.015] (1) |
102665 [0.120] (2) |
102792 [1.00N/0.869] (0) |
102811 [0.004] (1) |
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