information on AP22
(42333..42194)
Direction: -
Frame: 3
ORF
42496..42173 (Met: 42238 42232 42202)
SEYVSARDKRREFVSGFSGSAGLFLFSIVLDSNIVRIESLIESELNLIGDYKYIGLALIT
KKEARLWTDGRYFLQALQQLSDEWTLMRMGEDPLVEVWMSDVSPQLIF
GenBank annotation
42695..39437 C7A10.600
BLASTX cluster
42695..39440 cluster 10 3 hits for protein gene
BLASTN cluster
None
GENSCAN
44775..39414 gene model 9
Grail
42333..42170 exon Phase: 1 Score: 88
42496..42170 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
42259 [0.002] (0) |
42291 [0.044] (1) |
42310 [0.004] (0) |
42313 [0.001] (0) |
42333 [0.96N/0.707] (1) |
42494 [0.001] (2) |
42496 [0.94N/0.783] (0) |
Donor |
42194 [0.96N/0.056] (0) |
42201 [0.013] (2) |
42433 [1.00N/0.996] (1) |
42456 [0.003] (2) |
42466 [0.028] (1) |
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