information on AP22
(39816..39692)
Direction: -
Frame: 3
ORF
39910..39632 (Met: 39907)
QMVRLQQKLGSSPVRVNLDHILKAVYIHLFAEPGYYEDGNFGIRLENVLVVNDAETEFNF
GDKGYLQFEHITWVLTRCLLTNTVVLISTCTSE
GenBank annotation
42695..39437 C7A10.600
BLASTX cluster
42695..39440 cluster 10 3 hits for protein gene
BLASTN cluster
None
GENSCAN
44775..39414 gene model 9
Suboptimal exon
39907..39692 Intr Phase: 0 Score: 0.404
Grail
Shadow exon
39907..39629 exon Phase: 0 Score: 84
Exon-Intron boundary candidatates
| Acceptor |
| 39779 [0.016] (2) |
39798 [0.004] (1) |
39816 [1.00N/0.837] (1) |
39907 [0.038] (0) |
| Donor |
| 39692 [0.93N/0.058] (0) |
39780 [0.023] (2) |
39866 [0.81N/0.171] (0) |
39872 [0.005] (0) |
| 39883 [0.96N/0.094] (1) |
39905 [0.066] (0) |
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Entrance