information on AP22
(171838..171500)
Direction: -
Frame: 3
ORF
171841..171437 (Met: 171838 171727 171556 171526)
IMGLGFVNHYKSKGKLFELSDGNYKTELHHPCISRNVGMLLQQYKCFGSSAASLIQRNPL
FSSLDSKDVSYFKEILGEKNVVEDKERLETANTDWMHKYKGSSKLMLLPKNTQEVFYFSL
VSTVLLCLDCDDYLC
GenBank annotation
171838..168947 C7A10.960
BLASTX cluster
171838..168950 cluster 40 2 hits for protein gene
BLASTN cluster
None
GENSCAN
171727..168323 gene model 34
Suboptimal exon
171838..171500 Init Phase: 0 Score: 0.334
Grail
171828..171434 exon Phase: 1 Score: 89
Exon-Intron boundary candidatates
Acceptor |
171561 [0.019] (1) |
171612 [0.073] (1) |
171622 [0.004] (0) |
171673 [0.051] (0) |
171687 [0.002] (1) |
171712 [0.004] (0) |
171737 [0.004] (2) |
171801 [0.006] (1) |
171828 [0.94N/0.380] (1) |
Donor |
171473 [0.006] (0) |
171500 [0.96N/0.183] (0) |
171535 [0.74N/0.244] (1) |
[help]
Entrance