information on AP22
(69992..70958)
Direction: +
Frame: 2
ORF
69992..70972 (Met: 70016 70292 70307 70331 70334 70394 70505 70514 70613 70934 70952)
VPEGIIELMRNRTKPPLIVSETLCTPGVANTWQLQPRLLKLFAGSADLVDNKKKKEKKEK
KEKVKKAKTFNVFESEPDFESPYGRTITINRKDLKVLKGSMVGVSMVNLTQGSMMGPHWN
PWACEISIVLKGAGMVRVLRSSISSNTSSECKNVRFKVEEGDIFAVPRLHPMAQMSFNND
SLVFVGFTTSAKNNEPQFLAGEDSALRMLDRQVLAASLNVSSVTIDGLLGAQKEAVILEC
HSCAEGEIEKLKVEIERKKIDDERKRRHDERKKEEEEAKREEEERRKREEEEEKKRWPPQ
QPPQEEELRERQLPMEKEWEMEGEEES
GenBank annotation
69081..70975 C7A10.660
BLASTX cluster
69081..70756 cluster 15 2 hits for protein gene
BLASTN cluster
69294..71068 cluster 14 2 hits for EST
GENSCAN
69081..75276 gene model 13
Grail
69992..70309 exon Phase: 0 Score: 83
Exon-Intron boundary candidatates
Acceptor |
69992 [1.00N/0.929] (0) |
70001 [0.004] (0) |
70011 [0.234] (1) |
70013 [0.001] (0) |
70071 [0.010] (1) |
70091 [0.001] (0) |
70131 [0.017] (1) |
70264 [0.023] (2) |
70287 [0.003] (1) |
70392 [0.011] (1) |
70411 [0.055] (2) |
70467 [0.002] (1) |
70488 [0.048] (1) |
70563 [0.702] (1) |
70583 [0.007] (0) |
70590 [0.002] (1) |
70657 [0.005] (2) |
70688 [0.003] (0) |
70728 [0.001] (1) |
70748 [0.003] (0) |
70758 [0.001] (1) |
70804 [0.001] (2) |
Donor |
70045 [0.007] (0) |
70070 [0.100] (1) |
70180 [0.071] (0) |
70396 [0.078] (0) |
70402 [0.006] (0) |
70410 [0.004] (2) |
70442 [0.035] (1) |
70450 [0.015] (0) |
70494 [0.006] (2) |
70533 [0.004] (2) |
70627 [0.018] (0) |
70648 [0.155] (0) |
70958 [0.010] (1) |
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