information on AP22
(63358..61901)
Direction: -
Frame: 3
ORF
63634..61901 (Met: 63358 63277 63262 63253 63235 62614 62491 62458 62443 62221 62089 62056)
KTESYTNHCQSDCFVYKYYSVKPNKPGSDTVTKVEISLFARTHSKIKSLPLSPFKSPATF
FFSHTQRKKTERKKLFFFSLKAPPFFLLNTQHMKIPASSPQDTTNNNNNTNSTDSNHLSM
DEHVMRSMDWDSIMKELELDDDSAPNSLKTGFTTTTTDSTILPLYAVDSNLPGFPDQIQP
SDFESSSDVYPGQNQTTGYGFNSLDSVDNGGFDFIEDLIRVVDCVESDELQLAQVVLSRL
NQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIRLSSWSEIVQRIRAIKEYSGISPIP
LFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVV
AEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAI
FRRLSGITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAA
APPGDLVKKIVEAFVLRPKISAAVETAADRRHTGEMTWREAFCAAGMRPIQQSQFADFQA
ECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWRF
GenBank annotation
63358..61898 C7A10.650
BLASTX cluster
63358..61901 cluster 14 1 hits for protein gene
BLASTN cluster
63306..62953 cluster 13 1 hits for EST
GENSCAN
63358..61901 gene model 12
Suboptimal exon
63391..61901 Term Phase: 0 Score: 0.196
Grail
63600..61898 exon Phase: 1 Score: 84
Exon-Intron boundary candidatates
Acceptor |
61995 [0.001] (1) |
62105 [0.012] (2) |
62121 [0.012] (1) |
62137 [0.001] (0) |
62289 [0.063] (1) |
62294 [0.027] (2) |
62410 [0.004] (0) |
62420 [0.436] (2) |
62427 [0.019] (1) |
62473 [0.002] (0) |
62559 [0.057] (1) |
62568 [0.003] (1) |
62570 [0.037] (2) |
62779 [0.003] (0) |
62854 [0.003] (0) |
62875 [0.002] (0) |
62932 [0.016] (0) |
62985 [0.048] (1) |
63017 [0.002] (2) |
63055 [0.009] (0) |
63103 [0.005] (0) |
63391 [0.069] (0) |
63491 [0.001] (2) |
63600 [0.035] (1) |
Donor |
61905 [0.011] (2) |
62034 [0.006] (2) |
62421 [0.010] (2) |
62591 [0.015] (0) |
62808 [0.014] (2) |
62845 [0.067] (1) |
62890 [0.038] (1) |
62933 [0.013] (0) |
63037 [0.007] (1) |
63042 [0.88N/0.325] (2) |
63061 [0.042] (1) |
63292 [0.009] (1) |
63545 [0.005] (0) |
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Entrance