information on AP22    (60197..60102)

Direction: -

Frame: 2

ORF

    60251..59913  (Met: 60104 59972)
PVVLISSDILYILICRQQGSKQIYNNQIRPFLLRHQARVDQLVDGVYGEMVHDCFLLNSL
ILQSLLTNALKQNKKLQVKVVRSHQGEIRFVRAMIAKILGSGLFRNSNFLSLV

GenBank annotation

    61649..59750    C7A10.640

BLASTX cluster

    None

BLASTN cluster

    None

GENSCAN

    61649..59753    gene model 11
    Suboptimal exon

        60197..59948    Intr    Phase: 0    Score: 0.129

Grail

    60197..59910    exon    Phase: 0    Score: 63
    60366..60252    exon    Phase: 2    Score: 88
    Shadow exon

        60020..59910    exon    Phase: 0    Score: 59

Exon-Intron boundary candidatates

Acceptor
60006 [0.031] (2) 60014 [0.007] (0) 60020 [0.90N/0.540] (0) 60062 [0.023] (0)
60170 [0.005] (0) 60185 [0.058] (0) 60197 [1.00N/0.429] (0)
Donor
59914 [0.003] (2) 59948 [1.00N/0.967] (1) 59986 [0.066] (2) 60102 [0.95N/0.583] (0)
60117 [0.003] (0) 60119 [0.035] (1) 60246 [0.046] (0)

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Entrance