information on AP22    (53531..53859)

Direction: +

Frame: 1

ORF

    53470..53961  (Met: 53647 53656)
SVNTHQEQSKLYLRCFCFWSVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNM
LEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNV
VVDKCRLESEVFLIFNVSITSSFFPFHALLFFFFFFLALFFFSL

GenBank annotation

    53104..54769    C7A10.620

BLASTX cluster

    53104..54766    cluster 12    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    53104..59565    gene model 10
    Suboptimal exon

        53534..53859    Intr    Phase: 1    Score: 0.243

Grail

    53534..53859    exon    Phase: 1    Score: 90

Exon-Intron boundary candidatates

Acceptor
53511 [0.002] (2) 53531 [0.96N/0.819] (1) 53534 [0.96N/0.992] (1) 53537 [0.002] (1)
53540 [0.049] (1) 53545 [0.010] (0) 53548 [0.307] (0) 53554 [0.002] (0)
53714 [0.006] (1) 53720 [0.002] (1) 53755 [0.096] (0)
Donor
53605 [0.360] (1) 53859 [1.00N/0.993] (0)

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Entrance