information on AP22    (44775..44183)

Direction: -

Frame: 1

ORF

    44802..44182  (Met: 44775 44532 44499 44412 44310 44298)
RKIWERIFSMGKGGGCVPSKKKKPATTGDGPGIDDDNDATNAPIQIDDDQTTIDGDRTTA
TNTGGTTTPAITTTAAKISSPLKIFVVFYSMYGHVESLAKRMKKGVDSVEGVEATLYRVP
ETLSQEVVEQMKAPVKDLEIPEITAAELTAADGFLFGFPTRYGCMAAQMKAFFDSTGSLW
KEQSLAGKPAGFFVSTGTQGGGQETTA

GenBank annotation

    44775..43202    C7A10.610

BLASTX cluster

    44775..43205    cluster 11    1 hits for protein gene

BLASTN cluster

    44796..43006    cluster 11    2 hits for EST

GENSCAN

    44775..39414    gene model 9

Grail

    44775..44179    exon    Phase: 0    Score: 99

Exon-Intron boundary candidatates

Acceptor
44253 [0.003] (0) 44259 [0.002] (0) 44292 [0.011] (0) 44298 [0.047] (0)
44320 [0.69N/0.003] (2) 44406 [0.005] (0) 44412 [0.109] (0) 44427 [0.004] (0)
44449 [0.011] (2) 44490 [0.002] (0) 44507 [0.004] (1) 44739 [0.001] (0)
44759 [0.002] (1) 44765 [0.033] (1) 44787 [0.001] (0)
Donor
44183 [1.00N/0.951] (2) 44202 [0.013] (1) 44244 [0.214] (1) 44321 [0.526] (2)
44425 [0.036] (0) 44715 [0.006] (1)

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