information on AP22    (21882..21757)

Direction: -

Frame: 1

ORF

    22023..21427  (Met: 21918 21699 21663 21624 21531)
FRKRYRYGKLCLFKTSSGNFFLLFAFFYHLNSFLSMQFSDKVLCVDQLTKSIEGLLPLSQ
IHNPNDPRRKELNELEAIKTVIDQKAHSLVRRELWAGLGYLIIQTAGFMRLTFWDLTWDV
MEPICFYVSSVYFMAGYTFFLKTSREPSFQGFYQSRFEAKQRKLMQSEDFDVGRYDELKK
LFNPKPSGAVPKILGSLQN

GenBank annotation

    22529..21424    C7A10.540

BLASTX cluster

    22505..21427    cluster 5    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    22529..20253    gene model 3
    25905..24793    gene model 4

    Suboptimal exon

        21900..21757    Intr    Phase: 0    Score: 0.268

Grail

    21624..21424    exon    Phase: 0    Score: 76
    21918..21424    exon    Phase: 0    Score: 40

Exon-Intron boundary candidatates

Acceptor
21429 [0.008] (0) 21502 [0.002] (2) 21556 [0.488] (2) 21597 [0.001] (0)
21704 [0.004] (1) 21748 [0.003] (2) 21866 [0.003] (1) 21882 [0.454] (0)
21900 [0.86N/0.065] (0) 22018 [0.027] (2)
Donor
21462 [0.86N/0.017] (1) 21503 [0.263] (2) 21557 [0.158] (2) 21573 [0.051] (1)
21634 [0.88N/0.017] (0) 21735 [0.013] (1) 21784 [0.012] (0) 21972 [1.00N/0.992] (1)

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