information on AP22
(191811..192350)
Direction: +
Frame: 3
ORF
191787..192410 (Met: 191856 191865)
RVYFVLFQTYFDAPEGNEPLALDMEGMGKGQIWVNGESIGRYWTAFATGDCSHCSYTGTY
KPNKCQTGCGQPTQRWYHVPRAWLKPSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSE
YHPNIKNWQIESYGKGQTFHRPKVHLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAA
TSYAILERVKDIIFTQLKLESDSSSFFF
GenBank annotation
188285..192579 C7A10.1000
BLASTX cluster
188276..192576 cluster 43 25 hits for protein gene
BLASTN cluster
191809..192955 cluster 39 4 hits for EST
GENSCAN
185687..195679 gene model 38
Grail
191811..192350 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
191811 [1.00N/0.996] (0) |
191833 [0.94N/0.014] (1) |
191863 [0.001] (1) |
191942 [0.001] (2) |
191951 [0.008] (2) |
192011 [0.001] (2) |
192124 [0.010] (1) |
192139 [0.003] (1) |
192233 [0.001] (2) |
192238 [0.033] (1) |
192286 [0.042] (1) |
192375 [0.006] (0) |
Donor |
191874 [0.476] (1) |
191892 [0.006] (1) |
191931 [0.027] (1) |
192013 [0.005] (2) |
192034 [0.006] (2) |
192215 [0.476] (0) |
192237 [0.038] (1) |
192350 [0.96N/0.652] (0) |
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