information on AP22
(128025..128163)
Direction: +
Frame: 2
ORF
127796..128263 (Met: 127799 127901)
IMNNLFNLCNEGNKCEISRRDFAIRGGIVASGVSVMDTSSASSQSVQGKKKLALELLLLS
WSKNVIFVKKNLDDSLGSERLAFKPEGYNFWEWRGHKIHYVVQGEGSPLVLIHGFGASVF
HWRYLQSHLHALLISVGFKSTFYLIIRIRANIGRFL
GenBank annotation
127649..129299 C7A10.830
BLASTX cluster
127649..129296 cluster 29 1 hits for protein gene
BLASTN cluster
None
GENSCAN
127799..139538 gene model 28
Suboptimal exon
127901..127937 Init Phase: 0 Score: 0.359
Grail
127799..128252 exon Phase: 0 Score: 71
Exon-Intron boundary candidatates
| Acceptor |
| 127830 [0.90N/0.003] (1) |
127849 [0.003] (2) |
127852 [0.020] (2) |
127870 [0.007] (2) |
| 127928 [0.007] (0) |
128006 [0.001] (0) |
128025 [0.87N/0.716] (1) |
128029 [0.045] (2) |
| 128035 [0.003] (2) |
128052 [0.65N/0.011] (1) |
128055 [0.003] (1) |
128106 [0.001] (1) |
| 128112 [0.003] (1) |
128164 [0.002] (2) |
128205 [0.012] (1) |
| Donor |
| 127937 [1.00N/0.609] (1) |
128078 [0.016] (1) |
128163 [0.96N/0.047] (2) |
128200 [0.004] (0) |
| 128252 [0.013] (1) |
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Entrance