information on AP22
(122397..124016)
Direction: +
Frame: 3
ORF
122391..124016 (Met: 122556 122601 122904 122931 123099 123264 123432 123462 123480)
KKHERIICEDHKQNSFTHHQSIDDSLHANAAEAEASEEHNGTLPEKFKCTLSRTVMYDPV
IISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQISEWCAKNGLDVQDP
ARKHVKASNSIDFSVSIASFGSSLYNIPDHSGISITDFNSSYSIDSSSYSKMSKGGYFTP
MQRIDSASGAGDTDSSHSEIEIDPLCGLTNLPWDAQIKVVEDVRSRFEHSTRAFRSMSPS
KFLEPLITYLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESE
VVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEI
CLEMVSLDFIQKLTSFLQQKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESN
VPEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALV
EVDSDKEEEEEVSSRPEGRTTASPTSQVVTPVTHPEPVKITPSPKKSGLFGFNFSSLKKK
KK
GenBank annotation
121701..124019 C7A10.810
BLASTX cluster
121701..124001 cluster 27 1 hits for protein gene
BLASTN cluster
None
GENSCAN
121701..124016 gene model 26
Suboptimal exon
122451..124016 Term Phase: 0 Score: 0.280
Grail
122430..123972 exon Phase: 0 Score: 84
Exon-Intron boundary candidatates
| Acceptor |
| 122419 [0.017] (1) |
122430 [0.002] (0) |
122485 [0.014] (1) |
122569 [0.011] (1) |
| 122584 [0.011] (1) |
122657 [0.015] (2) |
122682 [0.002] (0) |
122692 [0.002] (1) |
| 122706 [0.003] (0) |
122713 [0.022] (1) |
122746 [0.002] (1) |
122904 [0.001] (0) |
| 122913 [0.043] (0) |
122937 [0.042] (0) |
122956 [0.113] (1) |
122971 [0.002] (1) |
| 122984 [0.004] (2) |
122998 [0.002] (1) |
123039 [0.006] (0) |
123080 [0.002] (2) |
| 123144 [0.001] (0) |
123227 [0.018] (2) |
123274 [0.005] (1) |
123291 [0.002] (0) |
| 123295 [0.001] (1) |
123298 [0.030] (1) |
123304 [0.001] (1) |
123307 [0.004] (1) |
| 123370 [0.006] (1) |
123393 [0.118] (0) |
123400 [0.044] (1) |
123412 [0.004] (1) |
| 123429 [0.011] (0) |
123504 [0.005] (0) |
123532 [0.001] (1) |
123575 [0.012] (2) |
| 123631 [0.006] (1) |
123787 [0.003] (1) |
123798 [0.002] (0) |
123832 [0.003] (1) |
| 123838 [0.047] (1) |
123875 [0.007] (2) |
123912 [0.006] (0) |
123925 [0.004] (1) |
| 123998 [0.020] (2) |
| Donor |
| 122511 [0.090] (1) |
122557 [0.005] (2) |
122617 [0.067] (2) |
122628 [0.862] (1) |
| 122762 [0.059] (0) |
122961 [0.004] (1) |
123056 [0.499] (0) |
123078 [0.005] (1) |
| 123108 [0.87N/0.038] (1) |
123254 [0.008] (0) |
123345 [0.121] (1) |
123482 [0.88N/0.038] (0) |
| 123585 [0.044] (1) |
123728 [0.015] (0) |
123797 [0.367] (0) |
123911 [0.090] (0) |
| 123972 [0.008] (1) |
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Entrance