information on AP22    (107858..108022)

Direction: +

Frame: 2

ORF

    107846..108268  (Met: 107894 107969 108032 108161 108188 108233 108242)
ISLQVLANQEKEKQKRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLV
REMSQYSQVNVSQNYFGQSSGVIGGGNVGIDLFDQRRNAFNYNPNMVFPNHTPPMFGYNN
DGVLVPISNMNYMSSYNFNQS

GenBank annotation

    107228..108271    C7A10.770

BLASTX cluster

    107228..108226    cluster 25    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    107228..108268    gene model 23
    Suboptimal exon

        107858..108268    Term    Phase: 0    Score: 0.116

Grail


    Shadow exon

        107894..108101    exon    Phase: 0    Score: 84

Exon-Intron boundary candidatates

Acceptor
107858 [0.96N/0.982] (0) 107873 [0.009] (0) 107923 [0.002] (2) 107934 [0.002] (1)
108065 [0.76N/0.049] (0)
Donor
107929 [0.005] (0) 107940 [0.099] (2) 108022 [0.87N/0.875] (0) 108049 [0.014] (0)
108101 [0.036] (1)

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