Jatropha Genome Database

JcPR01C6D2I.10 (JcS_200032.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcPR01C6D2I
Scaffold:
JcS_200032 JcCB0995411(+) =JcCB0295761(+) =JcPR01C6D2I(-) =JcCA0247191(-) =JcCD0149682(-) =JcCB0171531(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S4Y5_RICCO 94.7 95.5 97.7 (tr|B9S4Y5) Aminobutyrate aminotransferase, putative OS=Ricinus communis GN=RCOM_1392960 PE=3 SV=1
Arabidopsis_pep AT3G22200.1 85.9 83.7 97.7 | Symbols: POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase | chr3:7835286-7838863 FORWARD
soybean_pep Glyma12g02510.2 92.8 93.2 97.7  
Medicago_pep IMGA|Medtr4g103670.1 89.0 86.4 95.5 Aminotransferase class-III; ; chr04_pseudomolecule_IMGAG_V3 22386014-22374646 E EGN_Mt090430 20090702
grape_pep GSVIVT01015824001 88.2 86.4 95.5  
castor_bean_cds 30106.m000666 220 91.8 91.8 aminobutyrate aminotransferase, putative
castor_bean_pep 30106.m000666 94.7 95.5 97.7 aminobutyrate aminotransferase, putative
JAT_13201ests gi|268524469|gb|FM895149.1|FM895149 323 99.4 99.4 FM895149 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001928, mRNA sequence
KJC_r1 KJC_c01532 323 99.4 99.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcPR01C6D2I.10 length: 101 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 2.6e-20 29-73
HMMPfam PF00202 Aminotran_3 4.1e-09 29-80
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.2e-07 29-79
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 3.1e-09 29-73
no_ID  
HMMPanther PTHR11986:SF24 AMINOTRANSFERASE 2.6e-20 29-73