| JcS_102722 | JcCB0961551(-) =JcCD0138510(+) =JcCB0331501(+) =JcCB0296811(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q9XGJ6_GNEGN | 73.9 | 100.0 | 100.0 | (tr|Q9XGJ6) Putative MADS domain transcription factor GGM11 OS=Gnetum gnemon GN=ggm11 PE=2 SV=1 |
| Arabidopsis_pep | AT2G45650.1 | 72.4 | 97.1 | 97.1 | | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor | chr2:18804453-18806291 FORWARD |
| soybean_pep | Glyma07g08890.1 | 72.4 | 97.1 | 97.1 | |
| Medicago_pep | IMGA|Medtr4g147260.1 | 65.9 | 91.2 | 97.1 | Transcription factor, MADS-box; Transcription factor, K-box chr04_pseudomolecule_IMGAG_V3 36883844-36877638 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01027577001 | 73.9 | 100.0 | 100.0 | |
| castor_bean_cds | 30174.m008934 | 105 | 88.1 | 88.1 | mads box protein, putative |
| castor_bean_pep | 30174.m008934 | 72.8 | 97.1 | 100.0 | mads box protein, putative |
| JAT_13201ests | gi|262091321|gb|GT228748.1|GT228748 | 206 | 100.0 | 100.0 | JC313 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.E07.scf 5', mRNA sequence |
| KJC_r1 | KJC_c11056 | 63.9 | 89.3 | 89.3 |
| JcCD0138510.10 | length: 71 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| HMMPfam | PF00319 | SRF-TF | 4.3e-17 | 1-32 |
| HMMSmart | SM00432 | no description | 1.5e-07 | 1-34 |
| ProfileScan | PS50066 | MADS_BOX_2 | 18.348 | 1-35 |
| superfamily | SSF55455 | SRF-like | 1.2e-12 | 1-58 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 1.4e-23 | 1-33 |
| HMMPanther | PTHR11945:SF19 | MADS | 1.4e-23 | 1-33 |
| Seg | seg | seg | NA | 37-58 |