Jatropha Genome Database

JcCD0068965.10 (JcS_104156.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCD0068965
Scaffold:
JcS_104156 JcCB0191941(-) =JcCB0183341(-) =JcCD0068965(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S0L2_RICCO 223 88.5 90.2 (tr|B9S0L2) Auxin response factor, putative OS=Ricinus communis GN=RCOM_1355780 PE=4 SV=1
Arabidopsis_pep AT4G30080.1 127 70.6 88.2 | Symbols: ARF16 | ARF16 (AUXIN RESPONSE FACTOR 16); miRNA binding / transcription factor | chr4:14703369-14705564 REVERSE
soybean_pep Glyma13g20370.2 199 75.6 84.6  
Medicago_pep IMGA|Medtr2g110140.1 108 55.0 66.1 Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation chr02_pseudomolecule_IMGAG_V3 25776282-25779770 E EGN_Mt090430 20090702
grape_pep GSVIVT01016266001 181 72.6 82.3  
castor_bean_cds 30078.m002329 240 83.3 83.3 Auxin response factor, putative
castor_bean_pep 30078.m002329 223 88.5 90.2 Auxin response factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCD0068965.10 length: 124 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 23.213 43-121
no_ID  
HMMPfam PF02309 AUX_IAA 3.7e-11 33-121