Jatropha Genome Database

JcCD0053272.10 (JcS_200147.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCD0053272
Scaffold:
JcS_200147 JcCA0224291(+) =JcPR04JLXX1(-) =JHL02J17r(+) =JcCD0053272(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SI66_RICCO 211 78.9 82.0 (tr|B9SI66) Replication factor C / DNA polymerase III gamma-tau subunit, putative OS=Ricinus communis GN=RCOM_1321180 PE=4 SV=1
Arabidopsis_pep AT5G27740.1 192 70.3 76.6 | Symbols: EMB2775 | EMB2775 (EMBRYO DEFECTIVE 2775); DNA binding / nucleoside-triphosphatase/ nucleotide binding | chr5:9823831-9826869 FORWARD
soybean_pep --No_Hits--        
Medicago_pep IMGA|Medtr5g020710.1 68.6 45.5 64.9 hypothetical protein chr05_pseudomolecule_IMGAG_V3 7831697-7834680 H EGN_Mt090430 20090702
grape_pep GSVIVT01022436001 203 75.8 79.7  
castor_bean_cds 30072.m000942 454 89.9 89.9 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 30072.m000942 211 78.9 82.0 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03863 589 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCD0053272.10 length: 176 aa.
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 2.5e-21 74-144
IPR019483 DNA polymerase III, clamp-loader complex, subunit E, C-terminal
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
HMMPfam PF10424 RFC-E_C 4.5e-23 76-145
no_ID  
Gene3D G3DSA:1.20.272.10 no description 2.9e-20 76-144
Seg seg seg NA 118-137