Jatropha Genome Database

JcCD0001888.10

Related links:

GeneModel

Predicted Sequence Links:

Genome Sequence: JcCD0001888

Full length sequence(2048 bp)
Sequence Cut

Init: Term:
reverse complement

Scaffold:

No data.

Results of Blast2 searches (The best-hits are tabulated.):

database	Accession	Score	Iden (%)	Posi (%)	Definition
trembl	B9S9Q2_RICCO	385	55.7	72.8	(tr\|B9S9Q2) Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0520560 PE=3 SV=1
Arabidopsis_pep	AT3G26300.1	232	38.4	56.7	\| Symbols: CYP71B34 \| CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding \| chr3:9639199-9640866 REVERSE
soybean_pep	Glyma20g00970.1	356	51.2	72.3
Medicago_pep	IMGA\|Medtr5g018900.1	341	51.7	69.7	Cytochrome P450 chr05_pseudomolecule_IMGAG_V3 7002232-7003898 E EGN_Mt090430 20090702
grape_pep	GSVIVT01037975001	345	52.3	69.2
castor_bean_cds	29878.m000239	228	81.2	81.2	cytochrome P450, putative
castor_bean_pep	29629.m001350	385	55.7	72.8	cytochrome P450, putative
JAT_13201ests	gi\|237679862\|gb\|GO247167.1\|GO247167	52.1	92.1	92.1	JcrME_RL0711 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1	KJC_c02434	52.1	92.1	92.1

A list of protein families, domains and functional sites (searches in InterPro)

IPR001128	Cytochrome P450
JcCD0001888.10				length: 332 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0009055	electron carrier activity
Molecular Function	GO:0020037	heme binding
Gene3D	G3DSA:1.10.630.10	no description	4.6e-83	1-327
HMMPanther	PTHR19383	CYTOCHROME	6.2e-148	1-289
HMMPfam	PF00067	p450	8.5e-73	2-301
superfamily	SSF48264	Cytochrome	1.6e-88	1-324
IPR002401	Cytochrome P450, E-class, group I
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0020037	heme binding
Biological Process	GO:0055114	oxidation reduction
FPrintScan	PR00463	EP450I	3.4e-32	118-135 138-164 181-199 222-246 258-268 268-291
IPR017972	Cytochrome P450, conserved site
PatternScan	PS00086	CYTOCHROME_P450	NA	261-270
IPR017973	Cytochrome P450, C-terminal
FPrintScan	PR00385	P450	8e-12	129-146 182-193 259-268
no_ID
Coil	coil	coiled-coil	NA	152-173
HMMPanther	PTHR19383:SF170CYTOCHROME	P450,	6.2e-148	1-289
Seg	seg	seg	NA	188-200 275-286