Jatropha Genome Database

JcCB0968951.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0968951
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R715_RICCO 291 63.7 69.1 (tr|B9R715) Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1587620 PE=4 SV=1
Arabidopsis_pep AT1G27730.1 181 46.4 55.2 | Symbols: STZ, ZAT10 | STZ (salt tolerance zinc finger); nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding | chr1:9648302-9648985 REVERSE
soybean_pep Glyma06g04840.1 225 54.1 59.8  
Medicago_pep IMGA|Medtr1g023440.1 184 49.0 57.1 Zinc finger, C2H2-type chr01_pseudomolecule_IMGAG_V3 5223325-5222425 E EGN_Mt090430 20090702
grape_pep GSVIVT01037851001 94.7 46.3 59.3  
castor_bean_cds 30170.m013751 117 83.2 83.2 zinc finger protein, putative
castor_bean_pep 30170.m013751 291 63.7 69.1 zinc finger protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01103 1425 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0968951.10 length: 250 aa.
IPR007087 Zinc finger, C2H2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 101-121
154-174
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.099 99-121
152-174
IPR015880 Zinc finger, C2H2-like
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00355 no description 3.8 99-121
152-174
no_ID  
HMMPanther PTHR23224 ZINC 6.4e-06 1-177
HMMPanther PTHR23224:SF459ZINC FINGER 6.4e-06 1-177
Seg seg seg NA 62-79
131-143
185-199
superfamily SSF57667 C2H2 3.1e-06 95-175