Jatropha Genome Database

JcCB0942771.10 (JcS_100440.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0942771
Scaffold:
JcS_100440 JcCA0028741(+) =JcCD0054283(-) =JcCB0942771(-) =JcCD0101489(+) =JcCB0023641(+) =JcCB0246121(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7KD60_ARALY 77.8 78.7 93.6 (tr|D7KD60) EMB1144 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_891719 PE=4 SV=1
Arabidopsis_pep AT1G48850.3 77.4 85.7 100.0 | Symbols: EMB1144 | EMB1144 (embryo defective 1144); chorismate synthase | chr1:18065399-18067956 REVERSE
soybean_pep Glyma10g35560.1 76.3 75.5 87.8  
Medicago_pep IMGA|Medtr1g121140.1 72.0 74.5 89.4 Chorismate synthase chr01_pseudomolecule_IMGAG_V3 26335312-26332256 E EGN_Mt090430 20090702
grape_pep GSVIVT01016288001 70.9 85.4 95.1  
castor_bean_cds 28327.m000358 163 91.8 91.8 Chorismate synthase, chloroplast precursor, putative
castor_bean_pep 28327.m000358 76.3 90.5 97.6 Chorismate synthase, chloroplast precursor, putative
JAT_13201ests gi|268521452|gb|FM894204.1|FM894204 230 99.2 99.2 FM894204 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004503, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0942771.10 length: 58 aa.
IPR000453 Chorismate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004107 chorismate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPanther PTHR21085 CHORISMATE 2.3e-15 1-47
HMMPfam PF01264 Chorismate_synt 1.5e-12 1-43
superfamily SSF103263 Chorismate 1.8e-10 1-42
IPR020541 Chorismate synthase, conserved site
Molecular Function GO:0004107 chorismate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
PatternScan PS00788 CHORISMATE_SYNTHASE_2 NA 12-28